Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1284g00136 ATGAGTAAGCTGCAGAGTGATGGACTCAGAGAGGCCATATCCCAGGTTGTTGCCAATTCAAAGGAGAAAAATCGTAATTTCACTGAGACTATTGAGCTGCAGATTGGATTGAAGAACTATGACCCTCAGAAAGACAAGCGTTTCAGTGGCTCAGTTAAGCTCCCTCATATTCCTCGCCCTAAGATGAAGATTTGCATGCTTGGAGATGCTCAGCATGTGGAAGAGGCGGGAAAAATAGGACTGGACTGCATGGATGTGGAAGGGCTGAAAAAACTTAATAAAAACAAGAAGCTTGTTAAGAAGCTTGCCAAGAAGTACCATGCATTTTTAGCATCTGAGGCCGTCATCAAGCAAATCCCTCGTCTTTTGGGCCCCGGCTTAAATAAGGCTGGTAAGTTTCCAACACTGGTGACTCATCAAGAATCCTTGGAGTCAAAAGTTAATGAAACAAAAGCAATGGTGAAGTTTCAACTTAAGAAAGTTCTTTGTATGGGTGTTGCTGTTGGAAACTGCACAATGGAGGAGAAGCAGATCTTCCAGAACGTACAACTTAGTGTCAATTTCCTGGTTTCCTTATTGAAGAAGAATTGGCAAAATGTGAGGTGCTTGTACCTTAAAAGTACTATGGGGAGTGCAATCCGAGTATTTTAG 651 0.424 MSKLQSDGLREAISQVVANSKEKNRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDAQHVEEAGKIGLDCMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNCTMEEKQIFQNVQLSVNFLVSLLKKNWQNVRCLYLKSTMGSAIRVF 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1284g00136 216 Gene3D - 65 154 IPR016095 -
Pral1284g00136 216 FunFam Ribosomal protein 137 214 - -
Pral1284g00136 216 SUPERFAMILY Ribosomal protein L1 13 216 IPR023674 -
Pral1284g00136 216 Pfam Ribosomal protein L1p/L10e family 22 210 IPR028364 -
Pral1284g00136 216 Gene3D - 19 210 - -
Pral1284g00136 216 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 11 210 - -
Pral1284g00136 216 PIRSF RPL1p_RPL1a_RPL10e_RPL1o 1 216 IPR002143 GO:0003723|GO:0003735|GO:0006412|GO:0015934
Pral1284g00136 216 ProSitePatterns Ribosomal protein L1 signature. 116 135 IPR023673 -
Pral1284g00136 216 FunFam Ribosomal protein L10a 1 119 - -
Pral1284g00136 216 CDD Ribosomal_L1 9 215 IPR028364 -
Pral1284g00136 216 FunFam Ribosomal protein 65 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1284g00136 Pral-Chr1284 703162 707448 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1284g00136 1 216 Cytoplasmic Ribosomal Protein Gene Family AT5G22440 88.018 2.68e-126 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1284g00136 K02865 - gmx:100527763 390.578