Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1284g00093 ATGTCTCACCCCAGAAAGAAGCTTCATTTGAGCTCTGTCTCCGTCAAACTAGGCTGCAGCAGCTGCAGGGGACCAAAGCTCTCTCATATATTCCACCCAAAGCCTAAACCCAAGAACCCCTCTTACCATAAACACAAACTTTACAATCTTTCTTCTTCAAGCCACTGCGACTCCGCCACCACCACTACCACCACCACAACTTTCTCTCCCTATGTCGACTCCTCGCAGTTTTCTGACTCTGATTACTACGGCAATGCGTCGAGGACAGTCGGAGCTTTCGGCAGGGTAGGCGGCGAAGGCGTGGCGGTCGAGAAGGATTCCGACGACCCTTATCTGGATTTTAGGCACTCCATGCTTCAAATGATACTGGAGAATGAGATATACTCCAAGGACGATCTTCGGGAGCTTCTCAATTGTTTTCTTCAGCTCAATTCTCCCTACCACCATGGAGCTATAGTCAGAGCTTTCACTGAGATCTGGAATGGGGTCTTCTCTGTGAAGACCAGTTCACCCAGATTTCACTTCAGTCGCAAGTCACGTGACTTCTGA 549 0.4936 MSHPRKKLHLSSVSVKLGCSSCRGPKLSHIFHPKPKPKNPSYHKHKLYNLSSSSHCDSATTTTTTTTFSPYVDSSQFSDSDYYGNASRTVGAFGRVGGEGVAVEKDSDDPYLDFRHSMLQMILENEIYSKDDLRELLNCFLQLNSPYHHGAIVRAFTEIWNGVFSVKTSSPRFHFSRKSRDF 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1284g00093 182 ProSiteProfiles OVATE domain profile. 103 162 IPR006458 -
Pral1284g00093 182 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 48 165 IPR038933 GO:0045892
Pral1284g00093 182 NCBIfam uncharacterized plant-specific domain TIGR01568 101 161 IPR006458 -
Pral1284g00093 182 Pfam Transcriptional repressor, ovate 107 163 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1284g00093 Pral-Chr1284 445393 446100 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pral1284g00093 Ovate 1.3e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1284g00093 - - mtr:25499452 241.891