Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1284g00067 ATGGCGACGTACTTTCATGGTAATCCTGAAATCCAACCGCCCGATGGCCTCCAAACTCTGGTTCTCATGAACCCCGGCTATATCCACTACTCCGACACGCCGCCGCCTCCCCCGTCGCACTCCAGTAACTTGGTCTTCCTCAACTCCATCGCGGCTGGCAACAACTCGCTTGCTCCCCAAAACCTCCACCACGTGCCACCCAATCATACCCAGCAATTCGTGGGCATCCCTCTGCCGACCGTTGCCGCTGCCTCCTCCCAAGACCCCAACCAGCAACACTCCGTGCATGCTCACCAAGATGGCTCCGCCTTGCATGGATTTCTGCCTCGCATGCAGTGCAATCTCTGGAACCCAATCGACCCAAACGCGACGGCGCGTGAGACTCCACGAGCACAGCAGGGACTGTCACTGAGCCTGTCCTCCCAGCAAGCTGGAATGGGGTCTTTTCGGGTTGATCGTGACGTGACATCGCAGGGTCAAGCGCCTGCTATGTCCGGCGAAGACGTTCGCGGGTCGGGTGGTTCGCCGTCTTCGGCTTCTGGGGTGACCAACGTGAACGGTGTTTCGGGGATTCAGAGTGTGCTTCTAAGCTCCAAGTACTTGAAGGCAGCACAGGAACTTCTCGACGAGGCCGTCAATGTTAACAACGGCATCAAGACTGAGCTGGGAAAGAAGAACGGAGGGGCCCATACTAAAGCCACTGGGGAGACATCCGGAACAGCAGCTAGTGGCGACGTCTCTGTCGGCGGAGAAGGAAGCGCTAAGCGAGCCTCTGAGCTATCAGCAGCGGAGAGACAAGAGATTCAGATGAAGAAGGCTAAGCTAATCAGCATGCTTGATGAGGTGGAGCAGAGGTACCGGCAGTACCACCAGCAGATGCAGATAGTGATTTCGTCATTCGAGCAAGCTGCGGGAATTGGGTCGGCCAGAACATACACATCCCTTGCCCTGCAAACGATCTCCAAGCAGTTTCGCTGCCTGAAAGATGCCATTACAGCCCAAATTCGAGCTGCTAATAAGAGCTTAGGAGAAGAAGATTGCTTTGGAACCAAGATTGAAGGTTCGAGGCTCAAGTACGTGGACCATCACCTGCGCCAACAGCGAGCTCTCCAACAGTTGGGAATGATCCAGCACAATGCTTGGAGACCCCAGCGAGGGTTGCCCGAAAGATCTGTCTCTGTTCTACGTGCTTGGCTCTTTGAGCACTTCCTCCACCCTTATCCCAAGGATTCTGACAAGCACATGCTTGCTAAGCAAACAGGCCTCACGAGGAGCCAGGTTTCGAATTGGTTCATAAATGCTCGAGTTCGGCTCTGGAAACCAATGGTGGAAGAAATGTACACGGAGGAGATGAAGGAGCAAGAACAGAACGGATCTGAAGATAAATCAAGCAAGAGCGGTGAAGATCCTGCTATTAAAACGGCAGCACCACAACAAAAAGGCCCTGCCACTGAAACGGATGCCCGAAGCCTCAACTCCAGCAAAGACACGTTTTCAAATCAAAACACTCCTACAGCAGTTTCTAAACCATTAATATCATCACCGACTGGGGATAATGTCAGAAACCAGTTTGGATTCAGCTTCATGGGATCATCAGAGCTAGAAGGCATCACGCAGGGAAGTCCCAAGAAGCCAAGAAACCAAGAAATTCTACACTTCCCAACTTCAATAAACATGGACGTGAAGCCCAACGAGGCCAGTAATGAGCAACTTTCAATAAAATTTGGAGAGGAGAGGCAGGGGAGGGATGAATACCCATTCATGGGAACCCAAGCAAACTTTATCGGAGGTTTTGGACAATACCCGATTGGGGAGATCGGAAGGTTTGACGCAGAGCAGTTTACTCCAAGGTTTTCTGGGAATGGGGTTTCCCTGACTCTTGGTCTTCCCCATTGTGACACGTTATCAGGAAGCCATCAAACTTTTCTCCCAAGCCAGAACATTCAGTTGGGAAGAAGACTGGAGATGGGTGAATCGAACGAGTATGGAGCCATAAACCCTTCCACCGCCCACTCCTCAGCTGCATTTGAGAACATGAACTTGCAGAACCCTAAGAGGTTTGCTGCACAGTTGTTGCCAGACTTTGTCACCTAA 2094 0.5205 MATYFHGNPEIQPPDGLQTLVLMNPGYIHYSDTPPPPPSHSSNLVFLNSIAAGNNSLAPQNLHHVPPNHTQQFVGIPLPTVAAASSQDPNQQHSVHAHQDGSALHGFLPRMQCNLWNPIDPNATARETPRAQQGLSLSLSSQQAGMGSFRVDRDVTSQGQAPAMSGEDVRGSGGSPSSASGVTNVNGVSGIQSVLLSSKYLKAAQELLDEAVNVNNGIKTELGKKNGGAHTKATGETSGTAASGDVSVGGEGSAKRASELSAAERQEIQMKKAKLISMLDEVEQRYRQYHQQMQIVISSFEQAAGIGSARTYTSLALQTISKQFRCLKDAITAQIRAANKSLGEEDCFGTKIEGSRLKYVDHHLRQQRALQQLGMIQHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYTEEMKEQEQNGSEDKSSKSGEDPAIKTAAPQQKGPATETDARSLNSSKDTFSNQNTPTAVSKPLISSPTGDNVRNQFGFSFMGSSELEGITQGSPKKPRNQEILHFPTSINMDVKPNEASNEQLSIKFGEERQGRDEYPFMGTQANFIGGFGQYPIGEIGRFDAEQFTPRFSGNGVSLTLGLPHCDTLSGSHQTFLPSQNIQLGRRLEMGESNEYGAINPSTAHSSAAFENMNLQNPKRFAAQLLPDFVT 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1284g00067 697 MobiDBLite consensus disorder prediction 450 468 - -
Pral1284g00067 697 Coils Coil 265 292 - -
Pral1284g00067 697 Pfam Associated with HOX 194 332 IPR006563 -
Pral1284g00067 697 MobiDBLite consensus disorder prediction 221 252 - -
Pral1284g00067 697 SMART HOX_1 381 445 IPR001356 GO:0003677
Pral1284g00067 697 MobiDBLite consensus disorder prediction 124 184 - -
Pral1284g00067 697 Pfam Homeobox KN domain 398 437 IPR008422 GO:0003677|GO:0006355
Pral1284g00067 697 ProSiteProfiles 'Homeobox' domain profile. 378 441 IPR001356 GO:0003677
Pral1284g00067 697 FunFam BEL1-like homeodomain protein 9 384 446 - -
Pral1284g00067 697 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 93 464 - -
Pral1284g00067 697 CDD homeodomain 381 442 IPR001356 GO:0003677
Pral1284g00067 697 SMART prehox3 189 333 IPR006563 -
Pral1284g00067 697 Gene3D - 384 463 - -
Pral1284g00067 697 MobiDBLite consensus disorder prediction 479 518 - -
Pral1284g00067 697 MobiDBLite consensus disorder prediction 124 163 - -
Pral1284g00067 697 Coils Coil 201 221 - -
Pral1284g00067 697 MobiDBLite consensus disorder prediction 450 518 - -
Pral1284g00067 697 SUPERFAMILY Homeodomain-like 382 448 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1284g00067 Pral-Chr1284 297051 300382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1284g00067 1 696 Homeobox Transcription Factor Family AT2G35940 52.042 0.0 548
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Pral1284g00067 POX 3.7e-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1284g00067 - - pcin:129306285 1186.4