Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1284g00058 ATGGCCATGCAAACTGTTTATTTCAAAGAACATGAAGGAATTGTTCGCAATTCCATTGGGCAATTGTCGTCAGCAACCTCAGCCCCTTGGTGGACTGCCCTTGGATCTCAAGCAGCTCAACATGAGTCTTTTGGCCAAATGAAACCTTTTTCACTGGACTTTCCCAACTATGCCGACCATCTTACTGGCCCGAAGCAGCCAGGAAGAGCAGCCCATCAGGTTCTGGATAAAGGACACACCACACAGTTCACTATCTTCCCAGATTGCGAGATGTCAGATGATACACAAAAGCATCAGGCAGTCATGTCACTTCATTCATCCTCTCCTGAGCCTCGTGGTCATTTTGAGATAAAATTTAGCCAGCCTGTGATCTGTTCAAAATATCCTTACATGGATCGATTTTATGGGCTCATCTCAACATATGGACCTCAGATTCCGGGCCGTTTAATGCTGCCACTTAACTTGACATCCGATGATGGGCCAATTTATGTAAATGCTAAACAGTATCATGGGATCATCAGACGTCGGCAGTCACGTGCAAAGGCTTTACTTGAGAATAAATTGACAAAGCGCCGCAAGCCCTATATGCATGAATCGCGTCACCTCCATGCAATGAGACGACCAAGAGGATGCGGTGGTCGCTTCTTGAACACAAGAAGTCTGAAGAATGGGAATGGTGAAAGCGGAAGCACAGTGATCAAAACTGGGGAGGGTCTGTTCCAGTCTAGTGGTTCTCAGAGTTCTGAAGTTCTGCAATCAGATGGTGGAACTCTGAATTCATCAAAGGAAATAAATAGCAGCAGTTCAAGTATTTCAGGGTTTGATGTGACTAGCATGTATGCACGTGGAACTTTCGATAGCTTTGGCCTCAATCATGGGGGATCCTCCGTGCACTCTCTTGCAGACATGATAGATAGTGGACGTGGCATTGCCATGCCTGCGAAATGGGTTGCAGCAGCTGGTAACTGCTGCAAACTGTAA 981 0.4628 MAMQTVYFKEHEGIVRNSIGQLSSATSAPWWTALGSQAAQHESFGQMKPFSLDFPNYADHLTGPKQPGRAAHQVLDKGHTTQFTIFPDCEMSDDTQKHQAVMSLHSSSPEPRGHFEIKFSQPVICSKYPYMDRFYGLISTYGPQIPGRLMLPLNLTSDDGPIYVNAKQYHGIIRRRQSRAKALLENKLTKRRKPYMHESRHLHAMRRPRGCGGRFLNTRSLKNGNGESGSTVIKTGEGLFQSSGSQSSEVLQSDGGTLNSSKEINSSSSSISGFDVTSMYARGTFDSFGLNHGGSSVHSLADMIDSGRGIAMPAKWVAAAGNCCKL 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1284g00058 326 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 47 271 IPR001289 GO:0003700|GO:0006355
Pral1284g00058 326 ProSiteProfiles NF-YA/HAP2 family profile. 158 218 IPR001289 GO:0003700|GO:0006355
Pral1284g00058 326 MobiDBLite consensus disorder prediction 239 266 - -
Pral1284g00058 326 PRINTS CCAAT-binding transcription factor subunit B signature 161 183 IPR001289 GO:0003700|GO:0006355
Pral1284g00058 326 PRINTS CCAAT-binding transcription factor subunit B signature 192 215 IPR001289 GO:0003700|GO:0006355
Pral1284g00058 326 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 161 215 IPR001289 GO:0003700|GO:0006355
Pral1284g00058 326 Gene3D - 158 220 - -
Pral1284g00058 326 SMART cbf3 157 218 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1284g00058 Pral-Chr1284 240017 245022 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1284g00058 1 326 CCAAT-HAP2 Transcription Factor Family AT3G05690 41.311 1.16e-59 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Pral1284g00058 CBFB_NFYA 5.4e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1284g00058 K08064 - gmx:100527677 436.417