Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1284g00057 ATGGCCATGCAAACTGTTTATTTCAAAGAACATGAAGGAATTGTTCGCAATTCCATTGGGCAATTGTCGTCAGCAACCTCAGCCCCTTGGTGGACTGCCCTTGGATCTCAAGCAGCTCAACATGAGTCTTTTGGCCAAATGAAACCTTTTTCACTGGACTTTCCCAACTATGCCGACCATCTTACTGGCCCGAAGCAGCCAGGAAGAGCAGCCCATCAGGTTCTGGATAAAGGACACACCACACAGTTCACTATCTTCCCAGAAGATTGCGAGATGTCAGATGATACACAAAAGCATCAGGCAGTCATGTCACTTCATTCATCCTCTCCTGAGCCTCGTGGTCATTTTGAGATAAAATTTAGCCAGCCTGTGATCTGTTCAAAATATCCTTACATGGATCGATTTTATGGGCTCATCTCAACATATGGACCTCAGATTCCGGGCCGTTTAATGCTGCCACTTAACTTGACATCCGATGATGGGCCAATTTATGTAAATGCTAAACAGTATCATGGGATCATCAGACGTCGGCAGTCACGTGCAAAGGCTTTACTTGAGAATAAATTGACAAAGCGCCGCAAGCCCTATATGCATGAATCGCGTCACCTCCATGCAATGAGACGACCAAGAGGATGCGGTGGTCGCTTCTTGAACACAAGAAGTCTGAAGAATGGGAATGGTGAAAGCGGAAGCACAGTGATCAAAACTGGGGAGGGTCTGTTCCAGTCTAGTGGTTCTCAGAGTTCTGAAGTTCTGCAATCAGATGGTGGAACTCTGAATTCATCAAAGGAAATAAATAGCAGCAGTTCAAGTATTTCAGGGTTTGATGTGACTAGCATGTATGCACGTGGAACTTTCGATAGCTTTGGCCTCAATCATGGGGGATCCTCCGTGCACTCTCTTGCAGACATGATAGATAGTGGACGTGGCATTGCCATGCCTGCGAAATGGGTTGCAGCAGCTGGTAACTGCTGCAAACTGTAA 984 0.4624 MAMQTVYFKEHEGIVRNSIGQLSSATSAPWWTALGSQAAQHESFGQMKPFSLDFPNYADHLTGPKQPGRAAHQVLDKGHTTQFTIFPEDCEMSDDTQKHQAVMSLHSSSPEPRGHFEIKFSQPVICSKYPYMDRFYGLISTYGPQIPGRLMLPLNLTSDDGPIYVNAKQYHGIIRRRQSRAKALLENKLTKRRKPYMHESRHLHAMRRPRGCGGRFLNTRSLKNGNGESGSTVIKTGEGLFQSSGSQSSEVLQSDGGTLNSSKEINSSSSSISGFDVTSMYARGTFDSFGLNHGGSSVHSLADMIDSGRGIAMPAKWVAAAGNCCKL 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1284g00057 327 PRINTS CCAAT-binding transcription factor subunit B signature 193 216 IPR001289 GO:0003700|GO:0006355
Pral1284g00057 327 PRINTS CCAAT-binding transcription factor subunit B signature 162 184 IPR001289 GO:0003700|GO:0006355
Pral1284g00057 327 ProSiteProfiles NF-YA/HAP2 family profile. 159 219 IPR001289 GO:0003700|GO:0006355
Pral1284g00057 327 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 48 272 IPR001289 GO:0003700|GO:0006355
Pral1284g00057 327 MobiDBLite consensus disorder prediction 240 265 - -
Pral1284g00057 327 Gene3D - 159 221 - -
Pral1284g00057 327 SMART cbf3 158 219 IPR001289 GO:0003700|GO:0006355
Pral1284g00057 327 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 162 216 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1284g00057 Pral-Chr1284 240017 245022 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1284g00057 1 327 CCAAT-HAP2 Transcription Factor Family AT3G05690 41.193 1.88e-59 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Pral1284g00057 CBFB_NFYA 5.5e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1284g00057 K08064 - gmx:100527677 441.81