Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1284g00041 ATGAGAGTGAGGCTGTTAGACATGGTTTTGCTGAGAAGAAGGTTCAGGGAAGTCGGTTACAAGGTGGTGATCAGAGGCATGACAACGAAGGAGGAGAAGGAGATATTGAATGGGATCACTGGTTGCGTCAATCCAGGAGAAGTTCTGGCTTTGATGGGTCCTTCAGGAAGCGGAAAGACGACTCTCCTGAATCTTCTTGGAGGCAGGCTAAGTCAGCCCACTGTAAGTGGCTCCGTCACTTACAATGGGCAACCATATTCCAAGTTCTTAAAGAGCAGGATTGGATTCGTGACTCAAGATGATGTTCTGTTTCCTCACCTCACTGTGAAGGAAACACTGACGTACGCAGCACTCTTGAGACTGCCAAAGACAACCACGAAGGAGCAAAAGGAAAAACGAGCTTTAGATGTCATTCATGAGCTTGGGTTGGAGAGGTGCCAAGACACTATGATAGGCGGTTCTTTTGTCCGTGGAGTATCTGGTGGAGAAAGGAAGAGAGTTTGTATTGGCAATGAGATCATAATCAACCCTTCTCTTTTGTTTCTGGACGAGCCAACTTCTGGTTTGGATTCTACGACAGCCTTGAGAACTGTTCAGATGCTACAAAACATAGCAGAGGCTGGCAAAACAGTAGTGACAACAATTCACCAGCCATCTAGCAGACTGTTCCACAAATTCGATAAGTTGATCCTTCTGGGAAAAGGGAGCTTGCTTTACTTTGGAAAAGCATCAGAAGCAATGCCTTACTTCCAATCTATAGGATGCTCACCTCTTATTGCCATGAACCCGGCAGAATTTTTGCTGGACCTTGCCAATGGAAACATAAATGATGTATCTGTACCATCAGAGTTAGAGGATAAAGTACAGATGGGAAATGCAGCAACTGAAACCCGGAATGGGAAACCATCACCTGCACTCGTACATGAGTATTTGGTGGAGGCCTATGAGACTCGACTTCCAGAAACAGAGAAGAAAAAGCTAATGGATCCTATCCCCCTTGATGAAGAAGTGAAGACCAAGGTTTCTTCTCCTAAAAGACAATGGGGTGCGAGCTGGTGTGAGCAATATTCCATACTATTCTGGAGGGGAATCAAAGAGCGGAGACATGACTATTTTAGCTGGTTGAGAATCACCCAAGTTCTGTCCACTGCAATCATCTTAGGATTACTTTGGTGGCAATCGGATGCCAGCACACCAAAGGGTCTTCAGGATCAGGCGGGGCTGCTTTTCTTTATTGCTGTGTTTTGGGGATTCTTTCCGGTGTTCACTGCAATATTCACCTTTCCTCAAGAGAGAGCCATGCTGAATAAGGAACGTGCAGCTGATATGTATAGACTAAGTGCATACTTCTTAGCTAGGACCACGAGTGACCTTCCATTGGATTTGATATTACCGGTGCTTTTCCTCCTTGTTGTTTATTTCATGGCTGGCTTGAGAGTGAGTGCAGCTCCCTTTCTCCTCAGCATTCTCACTGTTTTCCTCTGCATCGTGGCGGCTCAGGGACTTGGACTTGCCATTGGTGCTACACTAATGGACTTGAAGAGAGCAACAACTTTGGCTTCAGTTACTGTGATGACCTTCATGCTGGCTGGAGGATTCTTTGTGAAGAGAGTCCCTATATTTATATCTTGGATTCGATACATGTCATTCAACTACCACACATATAAACTTCTACTGAAGGTGCAATATGAGCATATAACACCAAGCGTAAACGGGATGAGAATTGACAGTGGTTGGACGGAGGTGGCTGCTCTGATAGCCATGGTTTTTGGTTATCGCTTCTTGGCTTACCTTTCTTTGCGACGGATGAAACTTCAGTGA 1821 0.4536 MRVRLLDMVLLRRRFREVGYKVVIRGMTTKEEKEILNGITGCVNPGEVLALMGPSGSGKTTLLNLLGGRLSQPTVSGSVTYNGQPYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAALLRLPKTTTKEQKEKRALDVIHELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALRTVQMLQNIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAMPYFQSIGCSPLIAMNPAEFLLDLANGNINDVSVPSELEDKVQMGNAATETRNGKPSPALVHEYLVEAYETRLPETEKKKLMDPIPLDEEVKTKVSSPKRQWGASWCEQYSILFWRGIKERRHDYFSWLRITQVLSTAIILGLLWWQSDASTPKGLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLNKERAADMYRLSAYFLARTTSDLPLDLILPVLFLLVVYFMAGLRVSAAPFLLSILTVFLCIVAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVKRVPIFISWIRYMSFNYHTYKLLLKVQYEHITPSVNGMRIDSGWTEVAALIAMVFGYRFLAYLSLRRMKLQ 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1284g00041 606 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 3 259 IPR003439 GO:0005524
Pral1284g00041 606 Gene3D - 21 253 IPR027417 -
Pral1284g00041 606 Pfam ABC-2 type transporter 216 277 IPR043926 GO:0140359
Pral1284g00041 606 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 15 597 - -
Pral1284g00041 606 ProSitePatterns ABC transporters family signature. 159 173 IPR017871 GO:0005524|GO:0016887
Pral1284g00041 606 CDD ABCG_EPDR 15 241 - -
Pral1284g00041 606 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 251 IPR027417 -
Pral1284g00041 606 Pfam ABC-2 type transporter 354 563 IPR013525 GO:0016020|GO:0140359
Pral1284g00041 606 FunFam ABC transporter G family member 22 23 253 - -
Pral1284g00041 606 SMART AAA_5 45 236 IPR003593 GO:0016887
Pral1284g00041 606 Pfam ABC transporter 36 187 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1284g00041 Pral-Chr1284 162363 166142 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1284g00041 29 273 Calmodulin-binding Proteins AT2G36910 29.880 3.74e-18 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1284g00041 K05681 - gmx:100798801 1053.12