Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1284g00040 ATGACAACGAAGGAGGAGAAGGAGATATTGAATGGGATCACTGGTTGCGTCAATCCAGGAGAAGTTCTGGCTTTGATGGGTCCTTCAGGAAGCGGAAAGACGACTCTCCTGAATCTTCTTGGAGGCAGGCTAAGTCAGCCCACTGTAAGTGGCTCCGTCACTTACAATGGGCAACCATATTCCAAGTTCTTAAAGAGCAGGATTGGATTCGTGACTCAAGATGATGTTCTGTTTCCTCACCTCACTGTGAAGGAAACACTGACGTACGCAGCACTCTTGAGACTGCCAAAGACAACCACGAAGGAGCAAAAGGAAAAACGAGCTTTAGATGTCATTCATGAGCTTGGGTTGGAGAGGTGCCAAGACACTATGATAGGCGGTTCTTTTGTCCGTGGAGTATCTGGTGGAGAAAGGAAGAGAGTTTGTATTGGCAATGAGATCATAATCAACCCTTCTCTTTTGTTTCTGGACGAGCCAACTTCTGGTTTGGATTCTACGACAGCCTTGAGAACTGTTCAGATGCTACAAAACATAGCAGAGGCTGGCAAAACAGTAGTGACAACAATTCACCAGCCATCTAGCAGACTGTTCCACAAATTCGATAAGTTGATCCTTCTGGGAAAAGGGAGCTTGCTTTACTTTGGAAAAGCATCAGAAGCAATGCCTTACTTCCAATCTATAGGATGCTCACCTCTTATTGCCATGAACCCGGCAGAATTTTTGCTGGACCTTGCCAATGGAAACATAAATGATGTATCTGTACCATCAGAGTTAGAGGATAAAGTACAGATGGGAAATGCAGCAACTGAAACCCGGAATGGGAAACCATCACCTGCACTCGTACATGAGTATTTGGTGGAGGCCTATGAGACTCGACTTCCAGAAACAGAGAAGAAAAAGCTAATGGATCCTATCCCCCTTGATGAAGAAGTGAAGACCAAGGTTTCTTCTCCTAAAAGACAATGGGGTGCGAGCTGGTGTGAGCAATATTCCATACTATTCTGGAGGGGAATCAAAGAGCGGAGACATGACTATTTTAGCTGGTTGAGAATCACCCAAGTTCTGTCCACTGCAATCATCTTAGGATTACTTTGGTGGCAATCGGATGCCAGCACACCAAAGGGTCTTCAGGATCAGGCGGGGCTGCTTTTCTTTATTGCTGTGTTTTGGGGATTCTTTCCGGTGTTCACTGCAATATTCACCTTTCCTCAAGAGAGAGCCATGCTGAATAAGGAACGTGCAGCTGATATGTATAGACTAAGTGCATACTTCTTAGCTAGGACCACGAGTGACCTTCCATTGGATTTGATATTACCGGTGCTTTTCCTCCTTGTTGTTTATTTCATGGCTGGCTTGAGAGTGAGTGCAGCTCCCTTTCTCCTCAGCATTCTCACTGTTTTCCTCTGCATCGTGGCGGCTCAGGGACTTGGACTTGCCATTGGTGCTACACTAATGGACTTGAAGAGAGCAACAACTTTGGCTTCAGTTACTGTGATGACCTTCATGCTGGCTGGAGGATTCTTTGTGAAGAGAGTCCCTATATTTATATCTTGGATTCGATACATGTCATTCAACTACCACACATATAAACTTCTACTGAAGGTGCAATATGAGCATATAACACCAAGCGTAAACGGGATGAGAATTGACAGTGGTTGGACGGAGGTGGCTGCTCTGATAGCCATGGTTTTTGGTTATCGCTTCTTGGCTTACCTTTCTTTGCGACGGATGAAACTTCAGTGA 1743 0.4521 MTTKEEKEILNGITGCVNPGEVLALMGPSGSGKTTLLNLLGGRLSQPTVSGSVTYNGQPYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAALLRLPKTTTKEQKEKRALDVIHELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALRTVQMLQNIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAMPYFQSIGCSPLIAMNPAEFLLDLANGNINDVSVPSELEDKVQMGNAATETRNGKPSPALVHEYLVEAYETRLPETEKKKLMDPIPLDEEVKTKVSSPKRQWGASWCEQYSILFWRGIKERRHDYFSWLRITQVLSTAIILGLLWWQSDASTPKGLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLNKERAADMYRLSAYFLARTTSDLPLDLILPVLFLLVVYFMAGLRVSAAPFLLSILTVFLCIVAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVKRVPIFISWIRYMSFNYHTYKLLLKVQYEHITPSVNGMRIDSGWTEVAALIAMVFGYRFLAYLSLRRMKLQ 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1284g00040 580 Pfam ABC-2 type transporter 328 537 IPR013525 GO:0016020|GO:0140359
Pral1284g00040 580 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 225 IPR027417 -
Pral1284g00040 580 Pfam ABC-2 type transporter 190 251 IPR043926 GO:0140359
Pral1284g00040 580 SMART AAA_5 19 210 IPR003593 GO:0016887
Pral1284g00040 580 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1 233 IPR003439 GO:0005524
Pral1284g00040 580 ProSitePatterns ABC transporters family signature. 133 147 IPR017871 GO:0005524|GO:0016887
Pral1284g00040 580 CDD ABCG_EPDR 2 215 - -
Pral1284g00040 580 Pfam ABC transporter 10 161 IPR003439 GO:0005524
Pral1284g00040 580 FunFam ABC transporter G family member 22 1 227 - -
Pral1284g00040 580 Gene3D - 2 227 IPR027417 -
Pral1284g00040 580 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 6 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1284g00040 Pral-Chr1284 160193 166142 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1284g00040 3 247 Calmodulin-binding Proteins AT2G36910 29.880 2.75e-18 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1284g00040 K05681 - gmx:100798801 1036.94