Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1284g00038 ATGATGGAGAAAGCAAATACGTCCGGGGGGCTGGCAAGAACGAGATCGGACCAGCTGGTGGAGTCTCTGAAGGCGCAATCTTCAAGTGAATCGATGGGGTTGGTGGTGGAGCAGGCAGGAGCCGGGGGCGCCGGAGCCACTCCGTCGAGGAGGTCAAGTCGTCGGATGACGGCGGCATCGCCGGGGAGAAGCGGAGGAGGGAAGAACACGCACATAAGGAAGTCGAGGAGCGCTCAGCTGAAGTTTGAGCTGGACGAGGTGAGCAGCGGCGCGGCTCTTAGCCGAGCTTCGAGTGCCAGCCTGGGCCTTTCTTTCTCCTTCACCGGTTTCACCCTTCCTCCCGACGAAATCGCCGACTCCAAACCCTTCAGCGACGACGATATCCCGGAGGATATTGAAGCCGGAGCCGATAAACCAAAACTTCAAACAGAACCCACTCTGCCCATTTGTCTCCAGTTCAGGGAAGTCGGTTACAAGGTGGTGATCAGAGGCATGACAACGAAGGAGGAGAAGGAGATATTGAATGGGATCACTGGTTGCGTCAATCCAGGAGAAGTTCTGGCTTTGATGGGTCCTTCAGGAAGCGGAAAGACGACTCTCCTGAATCTTCTTGGAGGCAGGCTAAGTCAGCCCACTGTAAGTGGCTCCGTCACTTACAATGGGCAACCATATTCCAAGTTCTTAAAGAGCAGGATTGGATTCGTGACTCAAGATGATGTTCTGTTTCCTCACCTCACTGTGAAGGAAACACTGACGTACGCAGCACTCTTGAGACTGCCAAAGACAACCACGAAGGAGCAAAAGGAAAAACGAGCTTTAGATGTCATTCATGAGCTTGGGTTGGAGAGGTGCCAAGACACTATGATAGGCGGTTCTTTTGTCCGTGGAGTATCTGGTGGAGAAAGGAAGAGAGTTTGTATTGGCAATGAGATCATAATCAACCCTTCTCTTTTGTTTCTGGACGAGCCAACTTCTGGTTTGGATTCTACGACAGCCTTGAGAACTGTTCAGATGCTACAAAACATAGCAGAGGCTGGCAAAACAGTAGTGACAACAATTCACCAGCCATCTAGCAGACTGTTCCACAAATTCGATAAGTTGATCCTTCTGGGAAAAGGGAGCTTGCTTTACTTTGGAAAAGCATCAGAAGCAATGCCTTACTTCCAATCTATAGGATGCTCACCTCTTATTGCCATGAACCCGGCAGAATTTTTGCTGGACCTTGCCAATGGAAACATAAATGATGTATCTGTACCATCAGAGTTAGAGGATAAAGTACAGATGGGAAATGCAGCAACTGAAACCCGGAATGGGAAACCATCACCTGCACTCGTACATGAGTATTTGGTGGAGGCCTATGAGACTCGACTTCCAGAAACAGAGAAGAAAAAGCTAATGGATCCTATCCCCCTTGATGAAGAAGTGAAGACCAAGGTTTCTTCTCCTAAAAGACAATGGGGTGCGAGCTGGTGTGAGCAATATTCCATACTATTCTGGAGGGGAATCAAAGAGCGGAGACATGACTATTTTAGCTGGTTGAGAATCACCCAAGTTCTGTCCACTGCAATCATCTTAGGATTACTTTGGTGGCAATCGGATGCCAGCACACCAAAGGGTCTTCAGGATCAGGCGGGGCTGCTTTTCTTTATTGCTGTGTTTTGGGGATTCTTTCCGGTGTTCACTGCAATATTCACCTTTCCTCAAGAGAGAGCCATGCTGAATAAGGAACGTGCAGCTGATATGTATAGACTAAGTGCATACTTCTTAGCTAGGACCACGAGTGACCTTCCATTGGATTTGATATTACCGGTGCTTTTCCTCCTTGTTGTTTATTTCATGGCTGGCTTGAGAGTGAGTGCAGCTCCCTTTCTCCTCAGCATTCTCACTGTTTTCCTCTGCATCGTGGCGGCTCAGGGACTTGGACTTGCCATTGGTGCTACACTAATGGACTTGAAGAGAGCAACAACTTTGGCTTCAGTTACTGTGATGACCTTCATGCTGGCTGGAGGATTCTTTGTGAAGAGAGTCCCTATATTTATATCTTGGATTCGATACATGTCATTCAACTACCACACATATAAACTTCTACTGAAGGTGCAATATGAGCATATAACACCAAGCGTAAACGGGATGAGAATTGACAGTGGTTGGACGGAGGTGGCTGCTCTGATAGCCATGGTTTTTGGTTATCGCTTCTTGGCTTACCTTTCTTTGCGACGGATGAAACTTCAGTGA 2235 0.4814 MMEKANTSGGLARTRSDQLVESLKAQSSSESMGLVVEQAGAGGAGATPSRRSSRRMTAASPGRSGGGKNTHIRKSRSAQLKFELDEVSSGAALSRASSASLGLSFSFTGFTLPPDEIADSKPFSDDDIPEDIEAGADKPKLQTEPTLPICLQFREVGYKVVIRGMTTKEEKEILNGITGCVNPGEVLALMGPSGSGKTTLLNLLGGRLSQPTVSGSVTYNGQPYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAALLRLPKTTTKEQKEKRALDVIHELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALRTVQMLQNIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAMPYFQSIGCSPLIAMNPAEFLLDLANGNINDVSVPSELEDKVQMGNAATETRNGKPSPALVHEYLVEAYETRLPETEKKKLMDPIPLDEEVKTKVSSPKRQWGASWCEQYSILFWRGIKERRHDYFSWLRITQVLSTAIILGLLWWQSDASTPKGLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLNKERAADMYRLSAYFLARTTSDLPLDLILPVLFLLVVYFMAGLRVSAAPFLLSILTVFLCIVAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVKRVPIFISWIRYMSFNYHTYKLLLKVQYEHITPSVNGMRIDSGWTEVAALIAMVFGYRFLAYLSLRRMKLQ 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1284g00038 744 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 169 389 IPR027417 -
Pral1284g00038 744 MobiDBLite consensus disorder prediction 119 136 - -
Pral1284g00038 744 Pfam ABC-2 type transporter 492 701 IPR013525 GO:0016020|GO:0140359
Pral1284g00038 744 MobiDBLite consensus disorder prediction 116 136 - -
Pral1284g00038 744 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 151 397 IPR003439 GO:0005524
Pral1284g00038 744 Pfam ABC-2 type transporter 354 414 IPR043926 GO:0140359
Pral1284g00038 744 Gene3D - 151 390 IPR027417 -
Pral1284g00038 744 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 116 735 - -
Pral1284g00038 744 MobiDBLite consensus disorder prediction 9 34 - -
Pral1284g00038 744 ProSitePatterns ABC transporters family signature. 297 311 IPR017871 GO:0005524|GO:0016887
Pral1284g00038 744 FunFam ABC transporter G family member 22 161 391 - -
Pral1284g00038 744 Pfam ABC transporter 174 325 IPR003439 GO:0005524
Pral1284g00038 744 SMART AAA_5 183 374 IPR003593 GO:0016887
Pral1284g00038 744 MobiDBLite consensus disorder prediction 1 75 - -
Pral1284g00038 744 CDD ABCG_EPDR 148 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1284g00038 Pral-Chr1284 159325 166142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1284g00038 167 411 Calmodulin-binding Proteins AT2G36910 29.880 9.68e-18 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1284g00038 K05681 - qsu:111991111 1206.43