Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1284g00011 ATGGCTGCTGCGGTGGCAATTCCTCCTGAAGCTACCACGAGTGTAGACCCGACACAGATCGAGGTGAAGCTCTTTAACAGGTGGACGTTCGACGATGTTCAGGTTAATGATATCTCTTTGGCTGATTATATTGGAGTGGCCGCATCCAAGCATGCAACATACGTCCCTCACACTGCTGGTAGGTACTCAGTCAAGCGATTCAGGAAAGCACAGTGTCCAATAGTTGAGAGGCTTACTAATTCTCTCATGATGCATGGTAGAAACAATGGGAAGAAGTTAATGGCCGTGAGGATTGTTAAACATGCCATGGAAATTATCCACCTTCTGACTGATCAGAATCCAATTCAAGTTATTGTTGATGCTGTGATTAACAGCGGTCCTCGTGAAGACGCAACTCGAATTGGATCTGCTGGTGTTGTGAGGAGACAGGCTGTGGATATCTCACCTCTTCGCCGTGTTAATCAGGCCATCTATCTTCTAACTACCGGCGCCCGTGAAGCTGCTTTCAGAAATATAAAGACCATTGCTGAATGCTTGGCGGATGAACTTATCAATGCAGCAAAAGGGTCATCCAACAGCTATGCAATCAAGAAAAAGGACGAAATTGAAAGAGTTGCGAAGGCAAATCGCTAA 633 0.4581 MAAAVAIPPEATTSVDPTQIEVKLFNRWTFDDVQVNDISLADYIGVAASKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1284g00011 210 Pfam Ribosomal protein S7p/S5e 64 210 IPR023798 -
Pral1284g00011 210 SUPERFAMILY Ribosomal protein S7 23 210 IPR036823 -
Pral1284g00011 210 PANTHER RIBOSOMAL PROTEIN S7 5 210 IPR000235 GO:0006412
Pral1284g00011 210 NCBIfam 30S ribosomal protein S7 21 210 IPR005716 GO:0003735|GO:0006412|GO:0015935
Pral1284g00011 210 CDD uS7_Eukaryote 23 210 IPR005716 GO:0003735|GO:0006412|GO:0015935
Pral1284g00011 210 FunFam 40S ribosomal protein S5 6 210 - -
Pral1284g00011 210 ProSitePatterns Ribosomal protein S7 signature. 76 102 IPR020606 GO:0003723|GO:0003735|GO:0006412
Pral1284g00011 210 Gene3D Ribosomal protein S7 domain 4 210 IPR036823 -
Pral1284g00011 210 PIRSF RPS7p_RPS7a_RPS5e_RPS7o 1 210 IPR000235 GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1284g00011 Pral-Chr1284 80810 91842 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1284g00011 1 210 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 86.667 3.25e-134 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1284g00011 K02989 - gmx:100305898 372.859