Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1283g00216 ATGGCCGTCGTGGCGGAGAACACAGCTTCTGCTGCCCGATCTGACGCCAACTCCACTCCTCGTAAGAGGAAATTGAGATCCGATGCGCCACTGATTATGGACAGTCCGATTTCTCCGCCGACCAAATGGAAATCGCCTCGCCGATGTAGCAGTGAGAGCCTAAATCGTGCTGTCACCGCAAATGAGATGGTTACTAATGAAGGTAAAATCAAATCGCATAAATCGCTGTCGGAGTCAATGCAGGATGGTTTTGCTGATAAACCGAAATGGAACCCCAAAGATGGTGAGCAAGTAAGGACAGTGAAGGAGGCATTGCACGTGTCTACGGCGCCATCTAAAATTGTCTGCCGTGAAGACGAACAGAATACGGTTTTCGAGTTCTGTAAGTCATGCATCGAACATAAGAAGGCCGGGAGTATGTACATATGTGGGTGTCCTGGTACTGGAAAGTCGCTATCCATGGAGAAAGTAAAGGAGCTTTTAGTCGATTGGGCTAGACAGGCAGGCTTCCTTCAGCCCGATGTCTTATCTGTGAACTGCACATCACTTGCTAATACATCCGACATTTTCATCAAGATACTTGGATTAAACCAACCACGGGGAAAGAAGACTTCAGCTTCTCCCTTGCAACAACTTCAGAACTTGTACTCTCAAAAGTCATCAAGCCAGAAGATGACATTGATAGTGGTCGACGAATTAGATTATCTAATCACCAAAGATAGGGCTGTGCTTCACGATCTCTTCATGCTCACCACTTTCCCATTTTCTAGATGTATATTAATAGGAATATCAAATGCAATTGACCTTGCTGATCGTTTTCTTCCAAGGTTGAAATCATTAAACTGCAAGCCTATAATTGTAACATTCCGAGCATACTCTAAAGAACAGATCCTTGGCATTCTGAAGGAAAGGCTAAGGGAGCTCCCTTACGCTGTGTTCCAACATCAAGCACTAGAGCTCTGTGCCAGGAAAGTTGCTGCTGCTTCTGGAGACATGCGAAAAGCTCTTTGTCTATGCAGGAGTGCAATTGAGATGCAGGAGGCAGAAATTAGAGAATCTATTGGCCTTTCAGAAATTTCATTGGAAGAGAAAGCTCCCCCTCAACAAACGATAACTTCTGACCTCGATCATGTGAAAAAACAAGAATTTGATGTCGTAAGGATTGATCATATGGCTCTTGCCTTGTCCAAGACATATAGATCACCTGCGGTGGATACAATACAATCTCTACCACATCATCAACAGATCATCCTTTGCTCTTCCATGAAACATTTCAGTGGAACAAAGAAAGATACAATCCTTGGCGAGTTGTACAAATCTTACGCGGGCATATGCAAGTCTTCACTGATTCCTCCGGCTGGAATTTTGGAATTTTCAAATATGTGCAGAGTATTGAATGATCAGGGGCTTATTAAACTAGGGCCATCACGGGAGGACAAATTGAAGAGGGTGACACTAAGAATAGACGAAGCTGACATTACCTTTGCATTGCAGGGAATCCGTTTCTTTAGAAACTGTCTTCAGTAA 1527 0.4394 MAVVAENTASAARSDANSTPRKRKLRSDAPLIMDSPISPPTKWKSPRRCSSESLNRAVTANEMVTNEGKIKSHKSLSESMQDGFADKPKWNPKDGEQVRTVKEALHVSTAPSKIVCREDEQNTVFEFCKSCIEHKKAGSMYICGCPGTGKSLSMEKVKELLVDWARQAGFLQPDVLSVNCTSLANTSDIFIKILGLNQPRGKKTSASPLQQLQNLYSQKSSSQKMTLIVVDELDYLITKDRAVLHDLFMLTTFPFSRCILIGISNAIDLADRFLPRLKSLNCKPIIVTFRAYSKEQILGILKERLRELPYAVFQHQALELCARKVAAASGDMRKALCLCRSAIEMQEAEIRESIGLSEISLEEKAPPQQTITSDLDHVKKQEFDVVRIDHMALALSKTYRSPAVDTIQSLPHHQQIILCSSMKHFSGTKKDTILGELYKSYAGICKSSLIPPAGILEFSNMCRVLNDQGLIKLGPSREDKLKRVTLRIDEADITFALQGIRFFRNCLQ 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1283g00216 508 FunFam Cell division control protein 281 407 - -
Pral1283g00216 508 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 38 506 - -
Pral1283g00216 508 FunFam Cell division control protein 95 280 - -
Pral1283g00216 508 MobiDBLite consensus disorder prediction 1 52 - -
Pral1283g00216 508 Pfam AAA domain 135 251 IPR003593 GO:0016887
Pral1283g00216 508 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 104 357 IPR027417 -
Pral1283g00216 508 PIRSF Cdc6 3 508 IPR016314 GO:0006270|GO:0051301
Pral1283g00216 508 Gene3D - 282 405 - -
Pral1283g00216 508 Pfam CDC6, C terminal winged helix domain 418 496 IPR015163 -
Pral1283g00216 508 Gene3D - 406 497 IPR036388 -
Pral1283g00216 508 SMART Cdc6_C_2 418 497 IPR015163 -
Pral1283g00216 508 Gene3D - 94 281 IPR027417 -
Pral1283g00216 508 CDD Cdc6_C 411 493 IPR015163 -
Pral1283g00216 508 FunFam Cell division control protein 410 500 - -
Pral1283g00216 508 CDD AAA 120 281 - -
Pral1283g00216 508 Pfam AAA lid domain 314 349 IPR041083 -
Pral1283g00216 508 SUPERFAMILY "Winged helix" DNA-binding domain 404 506 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1283g00216 Pral-Chr1283 1216211 1222183 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1283g00216 11 507 Core DNA Replication Machinery Family AT2G29680 60.707 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1283g00216 K02213 - gmx:100791200 680.633