Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1283g00212 ATGGGGAAATCAGCGTTTCATGATTCTCTAAAAGCTCTGGAAGCTGATATTCAGTACGCCAATGATCTGTTATTAGGGTATCCGAGAGATAAAGATGGAGCATGCTTTCAAATGAGACTGTCATACGGTCCAGGTGCTACCTTATTTCTTTTTCTTGTTCAATGGGCGGATTACCACCTGGCTGGTGCTCTGGGTTTACTGAGAGTTCTAGTTTATATGACCTATGGAGATGGGAAGACCACCATGTCAATATATGAAAGGAAAGCAAGCATTAAAGAGTTTAACTCGGTTATATTTCCTGCTTTGTTGCAACTTGAGAAGGGCATCACAGATTTGGAGGAAAAGAAACAAAATGAAGTATATGCTATTAGATATAAGAAGAAAGAAAAACAATCAAAATTTGACGTGGAAAGAGAAGAGGAGTGTGGAATTTGCATGGAGGTGAAGGCAAAAGTTGTGCTGCCTAATTGCTGCCATTGCATGTGTTTGAAGTGCTTCAGGGATTGGTGTGAGAGATCCGAGTCATGCCCCTTTTGCCGGGGAAATCTTAAAAGGGTCAACTCATGTGACCTTTGGAATTACATAGATGAGGGTGATATTATGGATATCAGAGCGATTTTCAAAGAGAACCTTAAGAGGTTGCTTTGGTACATGGAGAAGTTGCCTATTGTTGATCCGGACCCCACGCATGTCTCTTATGAACCCTGTAGGAGTTAA 717 0.4128 MGKSAFHDSLKALEADIQYANDLLLGYPRDKDGACFQMRLSYGPGATLFLFLVQWADYHLAGALGLLRVLVYMTYGDGKTTMSIYERKASIKEFNSVIFPALLQLEKGITDLEEKKQNEVYAIRYKKKEKQSKFDVEREEECGICMEVKAKVVLPNCCHCMCLKCFRDWCERSESCPFCRGNLKRVNSCDLWNYIDEGDIMDIRAIFKENLKRLLWYMEKLPIVDPDPTHVSYEPCRS 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1283g00212 238 PANTHER RING FINGER PROTEIN 41, 151 4 228 - -
Pral1283g00212 238 ProSiteProfiles Zinc finger RING-type profile. 142 180 IPR001841 -
Pral1283g00212 238 FunFam RING/U-box superfamily protein 123 189 - -
Pral1283g00212 238 Pfam Ring finger domain 141 180 IPR001841 -
Pral1283g00212 238 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 109 192 IPR013083 -
Pral1283g00212 238 SUPERFAMILY RING/U-box 130 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1283g00212 Pral-Chr1283 1200230 1203669 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1283g00212 82 183 C3H Transcription Factor Family AT1G04360 24.107 2.53e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1283g00212 - K25840 gmx:100808567 372.089