Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1283g00209 ATGGATCAAGAGGACATTGAGAAGAAAGGAGAGGGAAGTGGGAAGAAGAGTATAATGACGGAGAGAGAGAATAGTAACTTTGGTATGAGAGGTCAAATGCTGAGGAAAATTATGGGCAACTTGCAAGAAGTTATCTTCGGCACCAAGCTTGCCGTGCTTTTTCCGGCCGTCCCTCTCGCCGTTGCCGCCGATACCTATCATTTTGGACGAGCGTGGATCTTTGCTCTGAGCTTACTTGGGCTGGCCCCTCTAGCTGAACGTGTCAGCTTTCTCACTGAACAAATCGCATATTACACTGGCCCCACAGTTGGAGGGCTTTTGAATGCCACATGTGGGAATGCGACTGAGATGATAATAGCACTATTGGCACTTCGCAAGAACAAAATCAACGTTGTCAAGTTCTCTCTTTTGGGTTCCATTCTCTCTAACCTCCTCTTGGTTCTTGGCTCTTCACTTCTCTGTGGAGGCCTTGCCAACCTAAAGAAAGAACAAAGATATGACCGAAAACAGGCAGATGTAAACTCACTCCTTTTGCTTTTGGGGTTGCTTTGCCATTTGCTGCCATTGATCTTTAAGTATGCCCTAGCAGGGGACCATTATCCTATAGCCACCAGTACTCTTCAATTGTCAAGAGCAAGTAGCATTGTTATGCTTCTTGCTTATGTTGCTTATATCTTCTTCCAATTGAAAACTCACAGACAGATATTTGATTCACAGGAGGAAGATGAGGAAGAAGAGAAGGCAACAATAGGATTTTGGGTAGCATTTACGTGGCTGGTGGCCATGACACTGCTCATATCTTTGCTTTCTGAATATGTTGTGGGGACTATTGAGGCTGCTTCAGATTCTTGGGGTATTTCTGTAAGCTTCATTAGCATAATTTTGCTCCCAATTGTGGGGAATGCTGCAGAACATGCTGGTTCAATCATATTTGCTTTTAAGAACAAGCTGGATATATCGCTTGGTGTTGCTATGGGATCTGCAACCCAAATTTCTATGTTTGTGGTTCCATTAAGTGTGATTGTTGCATGGATAATGGGTGTGCGAATGGACCTAGATTTTAATCTCCTAGAAACTGGGTGTCTTGCGCTGACCATAATAGTCACAGCTTTCACTTTGCAGGATGGAACTTCACACTATATGAAAGGAGTGGTGCTTACCCTTTGCTACTTTGTCATTGCTGCATGCTTTTTTGTTCATAAAGTTCCATTAGCCAATCAAATTCCTGGAGGGAATGTTAGATTTCAACCATCTGTGAATGCCATGGCCACTTGA 1275 0.4353 MDQEDIEKKGEGSGKKSIMTERENSNFGMRGQMLRKIMGNLQEVIFGTKLAVLFPAVPLAVAADTYHFGRAWIFALSLLGLAPLAERVSFLTEQIAYYTGPTVGGLLNATCGNATEMIIALLALRKNKINVVKFSLLGSILSNLLLVLGSSLLCGGLANLKKEQRYDRKQADVNSLLLLLGLLCHLLPLIFKYALAGDHYPIATSTLQLSRASSIVMLLAYVAYIFFQLKTHRQIFDSQEEDEEEEKATIGFWVAFTWLVAMTLLISLLSEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAFKNKLDISLGVAMGSATQISMFVVPLSVIVAWIMGVRMDLDFNLLETGCLALTIIVTAFTLQDGTSHYMKGVVLTLCYFVIAACFFVHKVPLANQIPGGNVRFQPSVNAMAT 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1283g00209 424 MobiDBLite consensus disorder prediction 1 21 - -
Pral1283g00209 424 Pfam Sodium/calcium exchanger protein 255 396 IPR004837 GO:0016020|GO:0055085
Pral1283g00209 424 Pfam Sodium/calcium exchanger protein 71 229 IPR004837 GO:0016020|GO:0055085
Pral1283g00209 424 NCBIfam calcium/proton exchanger 36 398 - -
Pral1283g00209 424 Gene3D - 101 399 IPR044880 -
Pral1283g00209 424 NCBIfam calcium/proton exchanger 55 398 IPR004798 GO:0006816|GO:0015369
Pral1283g00209 424 MobiDBLite consensus disorder prediction 1 18 - -
Pral1283g00209 424 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 25 402 IPR004713 GO:0006812|GO:0008324|GO:0016020
Pral1283g00209 424 FunFam Vacuolar cation/proton exchanger 245 399 - -
Pral1283g00209 424 FunFam Vacuolar cation/proton exchanger 101 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1283g00209 Pral-Chr1283 1168376 1172208 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1283g00209 34 403 Antiporters AT2G38170 70.106 0.0 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1283g00209 K07300 - gmx:100802344 600.897