Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1283g00185 ATGGCGGTTGAGGAATTGGAGTCCACTGGGTGCAGAAAGCGCAAACGAGGTTATGGAAGAAGAAAACTCGTCGTCAACGACAGAGTGGAGGTGAGGAGTATGGAAGATGGCTTTTTGGGTTCATGGCACCCAGGGACTGTTATCCATTGTGGGAAGCAGAAACGTCATGTAAAATATGACAATGTTTTAGTTGATAATGGGTCAAAATATCTTGTCGATATAGTGGATGTTCCAGCTATTTTGGATGGCGCCAGTTCCACAAGTTACAAAGAACGTGGATTCATTAGACCAGTACCACATTTGAAGGAGTTTGGGAACTATGATCTTCCGTTTGGTCTATGTGTTGATGTGAACTACCAAGAAGCTTGGTGGGAAGGTGTTATTTTTGATCAATCTGATGGGAGGGAGAAGAGATCCATATTTTTCCCAGATTTGGGTGATGAAATGAAGTTCGAAATTGGTCATTTGCGTATTACTCATGACTGGAATGAAGTTACAGAGGAATGGGAGAGACGGGGCATGTGGGTATTTCTTGAATTGATTGAAGAGTGTGAACAGGATACTTATGTTACAGTTTCAATAAAGCAAATCTGGTATGATGTGCGTGCCAAAGAAGATTTCAGTAAGATTAAAGACTGGACTTGTAATGTGAAAGACTTGTGGAGGGGTCCGGTGCTTGAGGTAATTAATGACTACTTTGCACTTACAATGACAGAAATTTTCAGAGTCCTGGATCTTTCAAAAGATCTCTTGACAGAAGCAACGGAACAAGAGTCCGGTGAACCTACTGCTGATATTCACTTTAGTCCGGAAAGAAATTCAGACAACTTTTATTCTGTTTCGAGTCCTGATAATCATCAGTTAACTAGCAAATCAAATGTTCATTATGATGCTGGTCCCAGGAATGCATTTGTCCATGACATAAGTTTGGCCGAGAACCATTTGGAAAAAGGTGACTTGTCAAACTTCTTGGATGCTGATCAAAACAGTGGTAGCATCATTCTTAACCAGAAGAAATATGATTTGGTGACCTTGGGGGACCGGGTGTCAAATACACCTGTGGTGGCAGACTCAGACGTGTCCTTTCCCGAGAAGGAAGGATTGGTGCAAAAGGAATCTATGTCACCAGAAGCCGAAGGAATTTCTGGGCAGGATGCTGGTACTGCAGGTGAAGTAAATTATGGAGCTGGTTGTTATAAAAGAAAAAGACAAGGCGGATTATCAACTCGCAGAAGTTTTACTGAGTGGAAACCTCTGATACTTTCTGAAGTTGAACTCTACCCTGATTCTGTTCATCAATATGCACTCGCATCTGATAGGAAGATCAGGGAACAACTGAAGACAAATGTCAGAAAACATATTGCATACCTTGGATGGAAAATTGAGTGGATGCAACATAAAGGAGGTACGCAACAAAAGCAATATAGGTACACCTCACCTGAGATAGGGGGAAAACAGGTTGTTTACATGTCACTTCGTGAAGTTTGCAAACATATTGAAAAGGACACCAATATGAACTCTTTGCTATCCCAAGATGATCAGAGAAGGACGAATCCTACAATTGACAATAATATTTCACATCCTACAATTTTGCCACCTTCTGTTGAAGACATAGTTGATCCTGAAATTTGCCCTGAAGCTGTTTTGAGATATTACTTGCTCCCATTAAAGAGGGGCCTCAGTGGTGTTAAAAATTTGATGATACGAAAGGTAAGAAAACAACTCTTAACTGAAGGATGGACCTTTGAGAATCCAACCATAAAAGGAAAGGGAATGATTTACATCTCACCACAAAATCAGCGTTTCGATTCACTTCGAGTAGCATGCAGAGAATATATTAAAGAATGTCTTCCTAAGTGGATTAGTTCTGGAATGATACCCCTGGATGTTTCGAGCATAAATGAAGAGAACACTGGCCTGGTTGCTAGTAATAAATTATTGTGTTGTGTGTCCCAATTGCTTCAAAAGGAGCCTGAATTGTATTATGTAACCAGTGAACCATCAAGCAGGTCAATTGGGCAATGCAAGTCAAAACCCTTAAGGAAGCAAAAGTCCCAAGATAATCAGAGAACTATGTATTCTACAATTGGCAGTAGTATCTCGCTTCCCGCAATTTTGCCACCTCCTTCTGTTGAAGATGCAATTGAACCTGAATTTTGTCCTAAAGCTGTTTTGAGATATTACTTGTATTCATCTGAGAAGTGCCCCAAGGATGTTAAAAAATGTATGATACTAAAGGCAAGAAGACACCTGTCATCAGAAGGATGGAATTTTGAGCATCCAACCATAAGGGGAAGAGGAATGATCTACATTTCACCACAAAGTCAGCGTTTTGGCTCACTCCGAGTAGCATGTGAAGCATGTATTAAAAAATGTCTTCCTGAGTGGATTAAGTCTGGAATGATGCCTCTAGATGACTTGGGCATTAATGAACAGAATATGAGTAAGGTTGACAGTGACGAACTATTGGACTATGTGTCCCATTTGCTTCAAAAGGAGCCTGAATTTTCTGATTTAAAAGGGGTACCAGAAAGCAGATCAAGCAGGCATTGCAAGCTCAAACCCTCCAGGAATCTAAGGTCCAGGCCACCTAATCTCCAGAGAAAAGAATTACCTATTCGGTTACAAAGATCAAGCAAAAGGGTGCAGAAGGTGAACGCTCCTTGTTCATCACACCTGAAAGCTCAAAATGTCCTGTCCTGGTTAATAGACTGCAATGTGTTGTTACCAAGGTCTAAGGTCCATTACCGGGCAAGAGCCACAGGTCATCCTATGGCTGAGGGGCGAATAACTCGTGATGGAATCAAGTGTAGTTGTTGTCAGAAGCTATATAGTCTTGGTGGCTTTGAAGGCCATGCAACTGGTCGTCGTAATTGCAGGTCAGCAGCTGCTAATATTGTTTTGGAAAATGGCAAGTCACTCCGAGATTTCCAGATGCAGTTAATGAATGAGCGTAGGACCAGAGGAACTACAAAAACACCATCAAAAAGCGTGCATCAAGAAGAGAATGACGGCATTTGTTCTGTTTGTCACTATGGCGGTGAACTAATATTGTGCGATAATTGCCCATCTTCATTTCATAAAAGCTGCATAGTTTTGGAGGATATCCCTGAAGGTGACTGGTTTTGCCCATCATGCTGTTGTGGAATTTGCCGCCAACGTAAAACTGAAGGGGCTGATGATGAAAAACTTTTGACTTGCAGCCAGTGTGAACATAAGTATCATGCTAAGTGCTTGGGTAAAAGGTCCGTAACAATGTCAGGAAGATATCTGAAGAATTGGTTTTGTGGAAAAAGCTGTGAAAAGATATATGCAGGCCTTCAAAGGCTATTAGGAGAACCTGTTGCAGTGGATGCGAAGAATTTAAACTGGACATTGCTGAAGTGGGTTGACTCTGAGAATTATGGTTTTGGGAATGGTAGAAATGACCTAGAGGTAGAGAGTTACAGCAAACTCAATGTGGCTCTTTCAGTGATGCATGAATGTTTTGAGCCCTTGAAGGAATCTTATTCAGGCAGGGATCTCATGGAAGACGTTATTTTTAGCAGATGGTCAAAGCTTAATCGATTGAACTTCCAAGGTTTCTATACCGTACTTCTGGAGAGAAATGAAGAAGTGATAACTGTAGCAACTGTTAGGATCTATGGAGAGAAGGTAGCAGAAGTACCTCTTGTGGGTACCAGATTTCAGTATCGTCGCCTTGGAATGTGTCGCATTTTAATGGATGAGCTTGAAAAGAGGCTCATGCAACTAGGGGTGGAGAGGATAGTTTTGCCTGCTGTTCCAAGTGTGCTAGAAACGTGGACTACTTCTTTTGGCTTTGCAAAGATGACAAATGCTGAGAGATCACAGTTTCTGGACTGCACTTTTCTTGACTTTCAAGACACCGTCATGTGCCAGAAGCTTTTGATCAAGAATCGTCCAGCTTCAGTTTTGTCAACAGTGAACCAAACAAAAGCACATGATGGTTTATCTGTAAGGGGTGGTACTGTTTTTTATCAGCGGAGTCCAGTATCTGAAGCATATCAAGCAGAAGAGATTGACACAAATGAGACGCTGGATCTACAAATGGTGGCAAAACTGGCAAATTCTGAGGGCAAACAATTGCAGAACGGAAGCATTGCAGAATGCTTACTTGAAGATGGCCGCTTAAAACATGTTTCCATCAATAATGCTCCATGTAAGTACTACAAGCGAAGGAAAATCAGCATGAAAAGATGA 4221 0.4144 MAVEELESTGCRKRKRGYGRRKLVVNDRVEVRSMEDGFLGSWHPGTVIHCGKQKRHVKYDNVLVDNGSKYLVDIVDVPAILDGASSTSYKERGFIRPVPHLKEFGNYDLPFGLCVDVNYQEAWWEGVIFDQSDGREKRSIFFPDLGDEMKFEIGHLRITHDWNEVTEEWERRGMWVFLELIEECEQDTYVTVSIKQIWYDVRAKEDFSKIKDWTCNVKDLWRGPVLEVINDYFALTMTEIFRVLDLSKDLLTEATEQESGEPTADIHFSPERNSDNFYSVSSPDNHQLTSKSNVHYDAGPRNAFVHDISLAENHLEKGDLSNFLDADQNSGSIILNQKKYDLVTLGDRVSNTPVVADSDVSFPEKEGLVQKESMSPEAEGISGQDAGTAGEVNYGAGCYKRKRQGGLSTRRSFTEWKPLILSEVELYPDSVHQYALASDRKIREQLKTNVRKHIAYLGWKIEWMQHKGGTQQKQYRYTSPEIGGKQVVYMSLREVCKHIEKDTNMNSLLSQDDQRRTNPTIDNNISHPTILPPSVEDIVDPEICPEAVLRYYLLPLKRGLSGVKNLMIRKVRKQLLTEGWTFENPTIKGKGMIYISPQNQRFDSLRVACREYIKECLPKWISSGMIPLDVSSINEENTGLVASNKLLCCVSQLLQKEPELYYVTSEPSSRSIGQCKSKPLRKQKSQDNQRTMYSTIGSSISLPAILPPPSVEDAIEPEFCPKAVLRYYLYSSEKCPKDVKKCMILKARRHLSSEGWNFEHPTIRGRGMIYISPQSQRFGSLRVACEACIKKCLPEWIKSGMMPLDDLGINEQNMSKVDSDELLDYVSHLLQKEPEFSDLKGVPESRSSRHCKLKPSRNLRSRPPNLQRKELPIRLQRSSKRVQKVNAPCSSHLKAQNVLSWLIDCNVLLPRSKVHYRARATGHPMAEGRITRDGIKCSCCQKLYSLGGFEGHATGRRNCRSAAANIVLENGKSLRDFQMQLMNERRTRGTTKTPSKSVHQEENDGICSVCHYGGELILCDNCPSSFHKSCIVLEDIPEGDWFCPSCCCGICRQRKTEGADDEKLLTCSQCEHKYHAKCLGKRSVTMSGRYLKNWFCGKSCEKIYAGLQRLLGEPVAVDAKNLNWTLLKWVDSENYGFGNGRNDLEVESYSKLNVALSVMHECFEPLKESYSGRDLMEDVIFSRWSKLNRLNFQGFYTVLLERNEEVITVATVRIYGEKVAEVPLVGTRFQYRRLGMCRILMDELEKRLMQLGVERIVLPAVPSVLETWTTSFGFAKMTNAERSQFLDCTFLDFQDTVMCQKLLIKNRPASVLSTVNQTKAHDGLSVRGGTVFYQRSPVSEAYQAEEIDTNETLDLQMVAKLANSEGKQLQNGSIAECLLEDGRLKHVSINNAPCKYYKRRKISMKR 1406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1283g00185 1406 MobiDBLite consensus disorder prediction 367 386 - -
Pral1283g00185 1406 MobiDBLite consensus disorder prediction 839 864 - -
Pral1283g00185 1406 CDD PHD1_AIRE 1007 1046 - -
Pral1283g00185 1406 Gene3D - 1161 1289 - -
Pral1283g00185 1406 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1182 1281 IPR016181 -
Pral1283g00185 1406 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1142 1303 IPR000182 GO:0016747
Pral1283g00185 1406 SMART PHD_3 1006 1047 IPR001965 -
Pral1283g00185 1406 SMART PHD_3 1048 1100 IPR001965 -
Pral1283g00185 1406 Pfam Agenet domain 26 99 IPR008395 -
Pral1283g00185 1406 Pfam Tify domain binding domain 928 981 IPR032308 -
Pral1283g00185 1406 SUPERFAMILY FYVE/PHD zinc finger 1047 1097 IPR011011 -
Pral1283g00185 1406 ProSiteProfiles Zinc finger PHD-type profile. 1004 1049 IPR019787 -
Pral1283g00185 1406 SMART ring_2 1048 1103 IPR001841 -
Pral1283g00185 1406 SMART ring_2 1007 1046 IPR001841 -
Pral1283g00185 1406 MobiDBLite consensus disorder prediction 669 689 - -
Pral1283g00185 1406 CDD NAT_SF 1198 1258 - -
Pral1283g00185 1406 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1049 1103 IPR013083 -
Pral1283g00185 1406 Pfam PHD-finger 1006 1048 IPR019787 -
Pral1283g00185 1406 CDD Tudor_Agenet_AtDUF_rpt1_3 23 99 - -
Pral1283g00185 1406 SUPERFAMILY FYVE/PHD zinc finger 993 1046 IPR011011 -
Pral1283g00185 1406 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 970 1048 IPR013083 -
Pral1283g00185 1406 PANTHER PHD FINGER PROTEIN 12 692 1351 IPR042163 GO:0003714|GO:0045892
Pral1283g00185 1406 SMART agenet_At_2 107 164 IPR014002 -
Pral1283g00185 1406 SMART agenet_At_2 21 85 IPR014002 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1283g00185 Pral-Chr1283 1031571 1039639 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1283g00185 32 256 PHD Transcription Factor Family AT5G58610 46.781 1.15e-60 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Pral1283g00185 Agenet 1.2e-14 CL0049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1283g00185 - - pcin:129318355 1174.07