Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1283g00182 ATGTGTATATATACACCTTGTTTGCCAGTTGGTCCCTCAAGAAAACATAGCACACACCAATTTGAGTACGCGAAGTTGAGCTCAGTTTCTGCGATGACTTCTTGGGTGAGAGGGAATTGTATCGGTAAGGGAGCGTTTGGCACCGTCAGTGTTGGGATTGACAGATGGGACGGTCGGGTCTTTGCGGTGAAATCGGTCGATCTCAACATGGCTCTTTCGGCTCAGGCGAAGGCTTTGGAGAATGAGATTCGGATTCTCCGGCGGGTTTCGCCGTCGCCTTACGTGGTGGAGTTTCTCGGGGATGACTTCACGACATCGTGTCGGAATTTGCACATGGAGTATATGCCGGGTGGCACCCTCGCTGACCTGGCGTCTCGGAATGCTGACGTGGATGAGGAGTTGGTGAGGTACTATACATGGTGCCTGGTGAACGCGCTGAGGAACGTCCACTCCAAGGGCGTCGTGCACTGCGACGTCAAGGGGAGGAACGTTCTGTTGGGGCCTAAAGGCTGCGTCGCGAAGCTCGCCGATTTCGGTTCAGCGGTCGAGTTTTCAGGTGAAGTGTGCTCGTCTGCGGTTCTACCACGGGGAAGCCCGCTTTGGATGGCTCCGGAGGTGATCCGACGGGAGTATCAGGGGCCAGAATCCGACGTGTGGTCCTTGGGATGCACGGTGATCGAAATGGTCAACGGGAAGCCGGGGTGGGAAGATCACGGCGGCGACACCCTTAGTCGAATCGGATACTCCGATGACTTGCCCGAATTGCCGGGTCAATTGTCAGAGCTCGGGCGGGATTTCCTCAAGAAGTGCCTGAGGAGGGAACCTAAACAGCGGTGGAGCTGCGATCAGCTGCTGCAGCACCCATTTTTGTCATCTGCGTCCCCCAATAAGCCAGTCGAGTCGTCTCCTCGGTGCATTCTTGACTGGAACAACTTAGAATTCACCGAAGAAGATGAAGAAGAGGAAATAATATTCGATCACAATGCTGAAGCTTCAGCTAAGGAAAGAATCCGCAAATTAGCCACAACAGTGAGGGCAGATTGGGAAACAGAAGATTGGGTGGCGGTGAGAGGATCGACATCAGACGCAGAATATACAGCAGTGGAAACAGGGGATGGCGGAAGTGGGGGTGGGGACGAGGAAGGGACAAATTCGGAATATCGGCATGGGACTGGGGCAGAAGAGGAAATGAAGGTAGGGACAAGTCGGGAATATTTGGATGATGTGGGAAGGGCAAATCCGGGAAAATGGGAATCGGACGGCAAGTGGTGGTTGTTGGGGTGGCGGTGTGATCACAGGGAAGGGAAAGAAAGAAGCAATTTAGCTGGTCGGAGCTGTCCTCATGAATATATATCAGAAAATGTAGATCTACATTTAGTGCTGACGGATAAAAGTAATGATAAGCATTGTTCACAGCTTGCGTTGTGTACTACTCAAATCGTGTTACTTCAATTCCTTACCCTTAATAAATTCAACTCTGTTATTTTCTCCACATATTTATCTTCTACCCGTTTTTTTTTTCTTGAACACGTGCCAAGAAAATGCGGGTAA 1551 0.5119 MCIYTPCLPVGPSRKHSTHQFEYAKLSSVSAMTSWVRGNCIGKGAFGTVSVGIDRWDGRVFAVKSVDLNMALSAQAKALENEIRILRRVSPSPYVVEFLGDDFTTSCRNLHMEYMPGGTLADLASRNADVDEELVRYYTWCLVNALRNVHSKGVVHCDVKGRNVLLGPKGCVAKLADFGSAVEFSGEVCSSAVLPRGSPLWMAPEVIRREYQGPESDVWSLGCTVIEMVNGKPGWEDHGGDTLSRIGYSDDLPELPGQLSELGRDFLKKCLRREPKQRWSCDQLLQHPFLSSASPNKPVESSPRCILDWNNLEFTEEDEEEEIIFDHNAEASAKERIRKLATTVRADWETEDWVAVRGSTSDAEYTAVETGDGGSGGGDEEGTNSEYRHGTGAEEEMKVGTSREYLDDVGRANPGKWESDGKWWLLGWRCDHREGKERSNLAGRSCPHEYISENVDLHLVLTDKSNDKHCSQLALCTTQIVLLQFLTLNKFNSVIFSTYLSSTRFFFLEHVPRKCG 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1283g00182 516 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 29 361 - -
Pral1283g00182 516 MobiDBLite consensus disorder prediction 364 400 - -
Pral1283g00182 516 Gene3D Transferase(Phosphotransferase) domain 1 29 360 - -
Pral1283g00182 516 FunFam Serine threonine protein kinase putative 33 341 - -
Pral1283g00182 516 ProSitePatterns Protein kinases ATP-binding region signature. 41 64 IPR017441 GO:0005524
Pral1283g00182 516 SMART serkin_6 35 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1283g00182 516 Pfam Protein kinase domain 38 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1283g00182 516 Coils Coil 69 89 - -
Pral1283g00182 516 MobiDBLite consensus disorder prediction 382 400 - -
Pral1283g00182 516 CDD STKc_MAPKKK 34 290 - -
Pral1283g00182 516 ProSiteProfiles Protein kinase domain profile. 35 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1283g00182 516 SUPERFAMILY Protein kinase-like (PK-like) 32 308 IPR011009 -
Pral1283g00182 516 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1283g00182 Pral-Chr1283 986541 988142 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1283g00182 26 513 MAP Kinase Kinase Kinase AT1G07150 47.358 1.40e-130 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pral1283g00182 Pkinase 2.4e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1283g00182 - - qsa:O6P43_014068 472.241