Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1283g00130 ATGGAAGAAGTTGAGCTTGCCTCTCATTCGCATTCAGAACAAAACCAACAATCTAATAAGGCAAGCAAACCAGAGAGTGTTTCCTTCTTTGGCTTGTTTTCTGCTGCAGATACAATTGACTATGTCTTGATGTTCTTGGGAAGTGTTGGTGCGTGCGTTCATGGCGCCGCTCTTCCTGTATTCTTCATCTTGTTCGGTCGTATGATTGATTCTTTAGGGCATCTTTCTAAGCATCCTCATAAGTTGTCGTCACGCATTTCTGAGAATGCATTGTACTTGGTCTACCTTGGACTGGTTGTTCTGGCATCGGCTTGGATGGGGGTCGCATTTTGGATGCAAACAGGGGAGAGGCAAACAGCTCGTTTGCGTTTCAAGTATCTACAGTCCGTTTTAAAAAAGGATATTAATTTCTTCGACAATGAGGCAAGAGACGCTAATATCATTTTCCACATTTCAAGTGACGCAGTATTAGTACAAGATGCAATCGGTGACAAGACAGGCCACGCTATACGTTACCTTTCACAATTCATTGTTGGATTTGCCATTGGATTTACGTCAGTATGGCAGCTTACACTGCTCACCTTGGCTGTAGTTCCATTAATAGCTGTAGCTGGGGGAGCTTATACTATAACCATGTCTACCTTGTCAGAAAAAGGTGAAGCAGCATATGCGGAAGCTGGGAAAGTGGCAGAAGAGGTAATTTCTCAGGTTCGTACGGTTTACTCATTTGTGGGAGAAGATAAAGCAGTTTCCTCATACTCCAAATCACTTGATAATGGTCTGAAGCTGGGAAAGAAGAGTGGCTTTGCAAAAGGAGTAGGGGTAGGCTTAACATATGGACTGTTGTTTTGTGCCTGGGCATTACTTCTTTGGTACGCAAGCATACTTGTGAGGCACCATAAAACAAACGGAGGGAAAGCATTCACAACTATCATTAATGTCATCTTTAGTGGATTTGCTCTTGGCCAAGCTGCGCCTAACCTCGCTGCCATTGCTAAAGGCCGTGCAGCAGCAGCCAATATCATGAACATGATTGCATCAGTTTCAGACAAGTCTAAAAGCTTGGACAAGGGGATTGTTTTGCCACAAGTGGAAGGGAAAATTGAATTTCGTGAGGTCTGCTTTTCTTACCCCTCAAGATCAAACTTGGTCTTTGAAAATTTGACCTTCACAGTAACTTCAGGGAAGACTATCGCAGTTGTTGGTCCTAGTGGTTCAGGAAAGAGCACTATCATTTCTATGATTCAAAGATTTTATGATCCCACTTCAGGTAAGATACTATTGGATGGACATGACCTAAAGAGTCTTCAATTGAAATGGTGGAGGAAACAAATGGGCTTGGTTAGTCAAGAACCGTTGCTATTTGCCACAACAATATCTGAAAATATTTTGCTTGGAAAAGAGGACGCAAACATGGATCAAATCATACAAGCAGCTAAAGCTGCAAATGCTCATTCTTTTATTGAAGGCTTACCTAATGGTTATCTTACTCCGGTAGGAGAAGGCGGTACACAACTTTCAGGAGGTCAGAAACAGAGAATAGCAATAGCAAGGGCAGTGCTCAGAAACCCAAAAGTATTACTTCTAGATGAAGCCACAAGTGCTCTTGATGCAGAATCAGAATTAATAGTTCAGCAGGCCCTGGAAAAATTAATGTCAAATCGGACTACAATTATTGTCGCCCACCGATTATCCACTATTCGCGATGTTGATACAATCGTGGTTTTGAAGAATGGTCAGGTTGTAGAAAGTGGAACTCATTCAGAATTGATGTCAAAAAATGGAGACTATGTGCATTTAGTGAGTTTGCAAGCATCAGACAACCCCATGGCAGGTTCAAGCGCAATATCTCGATCAGGAAGTTCAAGACATTCAAGTTTTCGGGAAGCTTCAGATAACCAAAAATACCCCGATGAATTGAAGTCCATTTCAACAAGAGAACCTCAACCTAGTGATCAAAAGTCCGTTCCATCCATCCTAGACTTGCTAAAACTAAATGCCCCTGAATGGCATTATGCGGTACTTGGATCAATTGGTGCAATTATGGCAGGCATGGAAGCTCCTCTCTTTGCTCTTGGTATCACACATATTTTGACTGCATTTTACTCCCCACATGGTTCTAAAATCAAGCAAGAAGTCGATCGGGTCGCTCTTATATTTGTTGGAGTTGCTGCTATTACTGTACCTGTTTATCTGTTGCAGCATTACTTTTATACATTGATGGGAGAGCGTCTCACTGCCCGTGTACGCTTATTAATGTTTTCAGCCATCCTGACCAATGAAATTGCATGGTTCGATTTGGATGAGAACAACACTGGATCATTAACAGCTATGCTAGCCGCAGATGCAACGTTAGTAAGAAGTGCTTTGGCAGATAGACTCTCAACTATTGTACAGAATGTAGCTCTCACTGTAACAGCATTTGCTATTGCCTTCACGTTGAGTTGGAAACTAACAGCTGTGGTTGCAGCTTGCTTGCCTCTGCTTATTGGGGCTTCCATCACTGAACAACTATTTCTTAAGGGCTTCGGGGGAGATTATAGTGCAGCTTACTCTAGAGCAACTTCGCTGGCACGTGAAGCTATCTCCAATATACGAACTGTTGCTGCTTTTGGTGCAGAAGATCGAATCTCGTTCCAATTTGCCTCTGAATTGAACAAACCTAACAAGCAAGCACTTTTACGAGGCCACATCTCAGGGTTTGGTTATGGTGTGACACAGTTATTTGCTTTCTGCTCTTATGCACTTGGCCTCTGGTATGCTTCTGTCTTGATCAAGCACAGAGAATCTAATTTCGGGGACATTATGAAGTCTTTTATGGTTTTAATTATCACCGCTCTGGCAATAGCAGAAACACTAGCTCTTACCCCAGACATTGTCAAAGGATCACAAGTTTTAGGGTCAGTTTTTAGTGTTCTCCGAAGGAGAACATCTATCCCACCCAATGAACCCAACTCAAAGGTGATGACTGATGTGAAAGGAGAGATAGACTTCAAAAATGTACACTTTAGCTATCCAATGAGACCTGAAATCACCATTTTTGAAAACTTGAACCTCAAAGTTAGAGCAGGAAAGAGTCTCGCAGTAGTCGGGCAAAGCGGTTCAGGGAAGAGTACTGTGATCTCACTGGTCATGAGATTTTACGACCCAACTCATGGAAGAGTTTTGATCGATGGATGTGATATCAGAAGCCTCAACTTGAGGTCCTTAAGGCTGAGAATAGCTCTGGTTCAACAAGAACCAGCATTATTCTCCACCACAATATATGAAAACATCAAGTATGGCAAAGAGGAGGCCTCAGAAATTGAGGTAATGAAGGCAGCGAAAGCAGCAAATGCTCATGAATTCATCGTTAGAATGCCTAAAGGGTATCAAACAGAGGTAGGAGAAAGAGGAGTGCAATTATCAGGAGGCCAGACAAGGCTTGCAATCGCAAGAGCCATTTTGAAAGACCCATCTATTCTCCTGTTAGATGAAGCAACAAGTGCACTGGACACAGTTTCAGAGAGATTGGTCCAAGAGGCTTTAGAAAAGCTTCTGGAAGGGCGAACAACCATCTTGGTTGCACACAGGTTATTAACAGTTCGAAATGCACACAGCATTGCTGTGTTACAAAATGGAAGAGTGGTTGAAATGGGTAGCCATGAGAGGCTAATTGCTCAACCTAAGAGCATTTATAAGCAGCTGGTTCGTCTACAACAGGATAATAGTGACCAAGCATTGAATTGA 3729 0.425 MEEVELASHSHSEQNQQSNKASKPESVSFFGLFSAADTIDYVLMFLGSVGACVHGAALPVFFILFGRMIDSLGHLSKHPHKLSSRISENALYLVYLGLVVLASAWMGVAFWMQTGERQTARLRFKYLQSVLKKDINFFDNEARDANIIFHISSDAVLVQDAIGDKTGHAIRYLSQFIVGFAIGFTSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYAEAGKVAEEVISQVRTVYSFVGEDKAVSSYSKSLDNGLKLGKKSGFAKGVGVGLTYGLLFCAWALLLWYASILVRHHKTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGRAAAANIMNMIASVSDKSKSLDKGIVLPQVEGKIEFREVCFSYPSRSNLVFENLTFTVTSGKTIAVVGPSGSGKSTIISMIQRFYDPTSGKILLDGHDLKSLQLKWWRKQMGLVSQEPLLFATTISENILLGKEDANMDQIIQAAKAANAHSFIEGLPNGYLTPVGEGGTQLSGGQKQRIAIARAVLRNPKVLLLDEATSALDAESELIVQQALEKLMSNRTTIIVAHRLSTIRDVDTIVVLKNGQVVESGTHSELMSKNGDYVHLVSLQASDNPMAGSSAISRSGSSRHSSFREASDNQKYPDELKSISTREPQPSDQKSVPSILDLLKLNAPEWHYAVLGSIGAIMAGMEAPLFALGITHILTAFYSPHGSKIKQEVDRVALIFVGVAAITVPVYLLQHYFYTLMGERLTARVRLLMFSAILTNEIAWFDLDENNTGSLTAMLAADATLVRSALADRLSTIVQNVALTVTAFAIAFTLSWKLTAVVAACLPLLIGASITEQLFLKGFGGDYSAAYSRATSLAREAISNIRTVAAFGAEDRISFQFASELNKPNKQALLRGHISGFGYGVTQLFAFCSYALGLWYASVLIKHRESNFGDIMKSFMVLIITALAIAETLALTPDIVKGSQVLGSVFSVLRRRTSIPPNEPNSKVMTDVKGEIDFKNVHFSYPMRPEITIFENLNLKVRAGKSLAVVGQSGSGKSTVISLVMRFYDPTHGRVLIDGCDIRSLNLRSLRLRIALVQQEPALFSTTIYENIKYGKEEASEIEVMKAAKAANAHEFIVRMPKGYQTEVGERGVQLSGGQKXRLAIARAILKDPSILLLDEATSALDTVSERLVQEALEKLLEGRTTILVAHRLLTVRNAHSIAVLQNGRVVEMGSHERLIAQPKSIYKQLVRLQQDNSDQALN 1243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1283g00130 1243 Pfam ABC transporter 1015 1163 IPR003439 GO:0005524
Pral1283g00130 1243 SUPERFAMILY ABC transporter transmembrane region 33 341 IPR036640 GO:0005524|GO:0016020
Pral1283g00130 1243 SUPERFAMILY ABC transporter transmembrane region 661 974 IPR036640 GO:0005524|GO:0016020
Pral1283g00130 1243 Pfam ABC transporter 386 534 IPR003439 GO:0005524
Pral1283g00130 1243 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 358 604 IPR027417 -
Pral1283g00130 1243 Gene3D - 358 613 IPR027417 -
Pral1283g00130 1243 PANTHER ABC TRANSPORTER B FAMILY 8 685 IPR039421 -
Pral1283g00130 1243 Gene3D ABC transporter type 1, transmembrane domain 31 963 IPR036640 GO:0005524|GO:0016020
Pral1283g00130 1243 CDD ABC_MTABC3_MDL1_MDL2 368 604 - -
Pral1283g00130 1243 MobiDBLite consensus disorder prediction 609 627 - -
Pral1283g00130 1243 FunFam ABC transporter B family member 4 986 1240 - -
Pral1283g00130 1243 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 996 1232 IPR003439 GO:0005524
Pral1283g00130 1243 Gene3D - 986 1242 IPR027417 -
Pral1283g00130 1243 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 45 333 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral1283g00130 1243 Pfam ABC transporter transmembrane region 45 317 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral1283g00130 1243 Pfam ABC transporter transmembrane region 678 947 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral1283g00130 1243 CDD ABC_MTABC3_MDL1_MDL2 996 1234 - -
Pral1283g00130 1243 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 674 961 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral1283g00130 1243 MobiDBLite consensus disorder prediction 628 642 - -
Pral1283g00130 1243 ProSitePatterns ABC transporters family signature. 506 520 IPR017871 GO:0005524|GO:0016887
Pral1283g00130 1243 CDD ABC_6TM_Pgp_ABCB1_D2_like 663 979 - -
Pral1283g00130 1243 FunFam ABC transporter B family member 4 358 610 - -
Pral1283g00130 1243 SMART AAA_5 1023 1209 IPR003593 GO:0016887
Pral1283g00130 1243 SMART AAA_5 394 580 IPR003593 GO:0016887
Pral1283g00130 1243 MobiDBLite consensus disorder prediction 609 654 - -
Pral1283g00130 1243 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 985 1234 IPR027417 -
Pral1283g00130 1243 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 368 603 IPR003439 GO:0005524
Pral1283g00130 1243 CDD ABC_6TM_Pgp_ABCB1_D1_like 44 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1283g00130 Pral-Chr1283 697781 703280 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1283g00130 3 604 Calmodulin-binding Proteins AT2G36910 37.891 2.38e-110 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1283g00130 K05658 - gmx:100787093 1989.93