Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1283g00123 ATGGAGGCTCTTGTGAAGGCGCCGCCGTGCCGTTTTTTTTCAAGGTCGCTCGTCGCAATGATGGTGGTTCTATTATTATTATTAGGTGGGTGGAGCGGGGAAGCCGAGGGTTTGGTGAAGCTGCCGCCAAATTTGAAAGTTCCGGCGGTGTTCGTGTTAGGAGATTCCGTCATGGACACCGGCAACAACAACGATTTGGCCTCACTGGCTAAGTGCAATTACCTTCCTTATGGCAGAGACTTCAAAGGCGGCGTTGCCACCGGCCGGTGTTGCAACGGAAAAGTTCCTTCTGATATTATAGTTGAGGAACTGGGCATCAAGGAGCTGTTGCCGCCATACAAGGACAAAAATCTGAAGCCTCAAGATCTGCTCACCGGAGTCAACTTTGCCTCCGCCGCCGCCGGATATGATCCTCTCACTTCCCAGCTTGCAAGAGCGACCCCAATGACGGATCAAGTGAAATGGTTCAAGGATTACAGAGAGAGGATAACAGGACTAGTTGGAGAGAAACGAACAAGGTTCATAATGGAGAACAGTGTGGTGGTGGTGGTGGCGGGCAGCGACGACATCGCCAACACATATTATGGCGCTCGCACCAGACAACTCCAGTACGATGTCCCCGCTTACACTGACTTAATGGTCAAAGGTGCCTCCGACATCGTCAAGGGATTATATGAGGTGGGGTCACGAAGAATCGGAGTGTTCGGGGCGCCTCCGATCGGGTGTGTGCCGTCACAGAGAACTTTAGCCGGAGGAATTCAGAGAAAGTGTGCAGAAAAAGAAAACGCGGCCGCTAGGCTATTTAACTCAAAGCTGGAAAATCGCTTGCGGGAGCTGGAACGTACTCTTGCCAATAGCACTATCCGTTACGTGGACATATACAACCCTCTTCTTGATGTCATTGTCAACTACAAAAAATATGGATATAAAGTGCCGGACAGGGGTTGTTGTGGGACGGGCATTATAGAGGCAGCATTTCTGTGCAACCGATACACTCCGACGTGCCCGGATATACAAAATTATGTGTTTTGGGACACTTTCCATCCTACCGAAGGAACCTACAGAAAGCTCATTCCTCCCATTCTTCAGAAATACGTGGATGACTACGCCCGCGGTATTACGGAAAGCAAGGAAGCAGCGGGCACAATGGTTGCAGTACGTGGCGGGGAGAGAGTGTTGGAAGTGTTTGGGGCGGTGATAATAGTGTTATCAGTGCTATGGTGGAAAACGGAGGGGCTGCTGAAGCTGCCGGAAAACGTGACGGTGCCGGCTGTGTTAGTGCTCGGGGATTCCATAATGGACACGGGGAACAATAACCAAAACCCTACGACGTTAGCTCGATGCAATTACAGGCCTTATGGCAAAGACTTTGAAGGTGGCGTCCCCACCGGCCGATTCGGCAACGGAAAAGTTCCCCCCGATCTCATTGTGGAAGAATTGGGAATCAAGGAACTGCTGCCGGCATATTTGGATCCGAATCTCCGGCCCGAGGATCTGCCCACCGGCGTCAACTTTGCATCCGGCGGCACGGGATACGATCCTTTGACCCCCAAATTAGCGTCAGCAATATCGTTGCCTGATCAAGTAGAGCTTCTCCGACAATACAAGGAGAAGCTAAAGGCAGTTGTTGGAGAAGAAAGAAGAGATTTCATCATGTCGAACAGCCTCGTTTTCGTGGTAGCAGGAAGTAATGACATTGCCAACACTTACTTCTCGTCTCGCACCAGGCAAGTCCACTACGATGTTCCTGCTTACACGGACCTTATGGCCACTTCAGCTTCTAACTTAGTAAAGGATTTATACGAAGCGGGGGTAAGAAGAGTGGGAGTGTTCAGTGCGCCGCCAATAGGATGTGTTCCATCCCAGAGAACATTAGCCGGAGGAGTAGAAAGAAAATGCGTAGACACATACAACGAGGCAGCGGAGTTATTTAACTCCAAGCTCTCCAAAGAGATGGCTTCCCTGAATCGCCAATTGCCCAGCAGCAGAATTGTTTACATTGATGTTTACAGCCCTCTGCTTGATGTAATCCTCAACTACCAAAAATATGGATTCAAGGTCGGGGATAAAGGATGCTGTGGCACTGGCAAAATAGAGGTGACAGAGTTATGCAATCATCTTACACAGACATGCCCCGTTGATTCAGAATATGTGTTCTGGGATAGTTTTCATCCAACTGAAGCTGCTTACAGAAAGCTCATCCTTCCCACCCTCACTAAATATATGGACCTATTCTTCTGA 2241 0.4962 MEALVKAPPCRFFSRSLVAMMVVLLLLLGGWSGEAEGLVKLPPNLKVPAVFVLGDSVMDTGNNNDLASLAKCNYLPYGRDFKGGVATGRCCNGKVPSDIIVEELGIKELLPPYKDKNLKPQDLLTGVNFASAAAGYDPLTSQLARATPMTDQVKWFKDYRERITGLVGEKRTRFIMENSVVVVVAGSDDIANTYYGARTRQLQYDVPAYTDLMVKGASDIVKGLYEVGSRRIGVFGAPPIGCVPSQRTLAGGIQRKCAEKENAAARLFNSKLENRLRELERTLANSTIRYVDIYNPLLDVIVNYKKYGYKVPDRGCCGTGIIEAAFLCNRYTPTCPDIQNYVFWDTFHPTEGTYRKLIPPILQKYVDDYARGITESKEAAGTMVAVRGGERVLEVFGAVIIVLSVLWWKTEGLLKLPENVTVPAVLVLGDSIMDTGNNNQNPTTLARCNYRPYGKDFEGGVPTGRFGNGKVPPDLIVEELGIKELLPAYLDPNLRPEDLPTGVNFASGGTGYDPLTPKLASAISLPDQVELLRQYKEKLKAVVGEERRDFIMSNSLVFVVAGSNDIANTYFSSRTRQVHYDVPAYTDLMATSASNLVKDLYEAGVRRVGVFSAPPIGCVPSQRTLAGGVERKCVDTYNEAAELFNSKLSKEMASLNRQLPSSRIVYIDVYSPLLDVILNYQKYGFKVGDKGCCGTGKIEVTELCNHLTQTCPVDSEYVFWDSFHPTEAAYRKLILPTLTKYMDLFF 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1283g00123 746 SUPERFAMILY SGNH hydrolase 425 733 - -
Pral1283g00123 746 FunFam GDSL esterase/lipase APG 414 742 - -
Pral1283g00123 746 Gene3D SGNH hydrolase 415 739 IPR036514 -
Pral1283g00123 746 Gene3D SGNH hydrolase 42 364 IPR036514 -
Pral1283g00123 746 Pfam GDSL-like Lipase/Acylhydrolase 50 357 IPR001087 GO:0016788
Pral1283g00123 746 Pfam GDSL-like Lipase/Acylhydrolase 425 733 IPR001087 GO:0016788
Pral1283g00123 746 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 50 61 IPR008265 GO:0006629|GO:0016298
Pral1283g00123 746 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 425 436 IPR008265 GO:0006629|GO:0016298
Pral1283g00123 746 FunFam GDSL esterase/lipase APG 39 366 - -
Pral1283g00123 746 CDD SGNH_plant_lipase_like 423 731 IPR035669 -
Pral1283g00123 746 Coils Coil 262 289 - -
Pral1283g00123 746 PANTHER GDSL ESTERASE/LIPASE EXL3 405 733 - -
Pral1283g00123 746 CDD SGNH_plant_lipase_like 48 355 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1283g00123 Pral-Chr1283 664803 676028 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1283g00123 419 733 Pollen Coat Proteome AT1G75910 41.195 4.31e-70 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1283g00123 - - cave:132189196 861.677