Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1283g00064 ATGGCTGCGGGAATGGATTTTTCTCCCCCATTTACCGTGTTAGAGGGCACTCAAGGTGGTTACAACAAAGACAATGCATCCATCATGGAAGATGAGAAATCCAGAGATTCGAACAAAGTGAAACAAACGGCACTTGGCAAACCCCCACGGAACCTCTCCCACATGAGACACAGCATCAGCTCTAACAGGTTGCAAGCTGCCGCAGATTTGAGTTTTGATTCAGGGGTTGTTGGGAGTAAATCGTCTTCTGACGAGAAGGCAGAGTTTCAACCCATATATAGGTCAGGAAGTTGCGCTGAAACTGGACCTAAACAGTACATGGAAGATGAACACATCTGTGTTGATGACCTTATTGAGCAACTAGGTTCAGTATCAGAAATTCCTTCTCCTGGAGCTTTCTACGGGGTGTTTGATGGTCATGGTGGGACTGATGCAGCTACATATATAAGAAATAACATCCTCAGATTTATAGTTGAGGATCCTCATTTTCCAACTTACCTAGAGAAGGCAATTAAAAGTGCCTTTCTGAAAGCTGATTATGCATTTGCAGATGCTAGTTCGCTTGACATCTCTTCTGGCACCACTGCTCTAACTGCACTTGTATTCGGAAGGAGCCTGATAGTTGCGAATGCTGGAGATTGTCGAGCTGTGCTAGGGAGACGCGGGAGAGCAATAGAGATGTCAAAAGACCACAAACCAAATAGCAGCTCAGAAAGGTTAAGGATTGAGAACCTTGGTGGGGCGGTATATGATGGATACCTGAATGGTCAACTCTCTGTTGCGCGTGCGTTAGGAGACTGGCACATGAAGGGTCCCAAGGGTTCTGCCTGCCCTTTAAGTGCTGAACCAGAGTTGCAGGAAATCCTCTTGACAGAGGACGACGAGTTCTTGATTATGGGATGTGACGGCCTCTGGGATGTTATGAGCAATCAATGTGCTGTGACCATGGCGAGGAGAGAGTTGATGCTACATAATGATCCCGAAAGGTGTTCAAGAGAGCTTGTCAGAGAGGCTCTTAAGCGCAACACTTGTGATAACTTAACTGTCATAGTGGTGTGTTTCTCCCTAGATCCTCCTCCTCGGATTGAGCCGCCTCCTTCTCGAGTCAGGAGGAGTATTTCAGCGGAAGGGCTCAATTTACTCAAGGGTGTACTAGATTGTAATTCATGA 1170 0.465 MAAGMDFSPPFTVLEGTQGGYNKDNASIMEDEKSRDSNKVKQTALGKPPRNLSHMRHSISSNRLQAAADLSFDSGVVGSKSSSDEKAEFQPIYRSGSCAETGPKQYMEDEHICVDDLIEQLGSVSEIPSPGAFYGVFDGHGGTDAATYIRNNILRFIVEDPHFPTYLEKAIKSAFLKADYAFADASSLDISSGTTALTALVFGRSLIVANAGDCRAVLGRRGRAIEMSKDHKPNSSSERLRIENLGGAVYDGYLNGQLSVARALGDWHMKGPKGSACPLSAEPELQEILLTEDDEFLIMGCDGLWDVMSNQCAVTMARRELMLHNDPERCSRELVREALKRNTCDNLTVIVVCFSLDPPPRIEPPPSRVRRSISAEGLNLLKGVLDCNS 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1283g00064 389 SMART PP2C_4 84 352 IPR001932 -
Pral1283g00064 389 ProSitePatterns PPM-type phosphatase domain signature. 133 141 IPR000222 GO:0043169
Pral1283g00064 389 PANTHER PROTEIN PHOSPHATASE 2C 65 352 IPR015655 GO:0004722|GO:0006470
Pral1283g00064 389 SMART PP2C_SIG_2 109 354 IPR001932 -
Pral1283g00064 389 ProSiteProfiles PPM-type phosphatase domain profile. 94 354 IPR001932 -
Pral1283g00064 389 MobiDBLite consensus disorder prediction 1 55 - -
Pral1283g00064 389 CDD PP2Cc 93 354 IPR001932 -
Pral1283g00064 389 SUPERFAMILY PP2C-like 89 354 IPR036457 -
Pral1283g00064 389 MobiDBLite consensus disorder prediction 26 40 - -
Pral1283g00064 389 Gene3D - 75 357 IPR036457 -
Pral1283g00064 389 FunFam Probable protein phosphatase 2C 22 79 357 - -
Pral1283g00064 389 Pfam Protein phosphatase 2C 94 346 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1283g00064 Pral-Chr1283 397566 400064 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1283g00064 5 386 PP2C-type Phosphatase Gene Family AT2G33700 72.656 0.0 557
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1283g00064 K14803 - cave:132190044 636.721