Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1283g00036 ATGGTGAAGGAGACCGAATACTATGACGTGCTGGGAGTCAGTCCCACGGCAACTGAGGCCGAGATTAAAAAAGCTTATTACATGAAGGCGCGACAAGTCCATCCAGATAAAAACCCAAATGACCCTAACGCAGCAGAAAAATTTCAGGTTTTGGGTGAGGCTTATCAGGTTTTGAGTGACCCTCACCAACGGCAAGCTTATGATACTCATGGAAAATCTGGAATCTCAACTGATGCTATTATTGATCCAGCAGCAATCTTCGCCATGCTTTTTGGCAGTGAGCTTTTTGAGGACTACATCGGCCAATTAGCCATGGCATCAATGGCATCAATGGATATCTTTAGTGAAGGGGAACAATTTGATGCGAAAAAGTTACAAGAGAAAATGAGGGTGGTTCAGAAAGAGAGAGAAGAAAAGCTTGCAGAGATACTTAAAAACAGACTAAACCAATATGTCCAAGGAAACAAATCGGAATTCATCAATCATGCAAAGGATGAAGTGTCACGACTATCCAATGCAGCTTATGGCGTTGATATGTTGAATACCATTGGCTACATATATGCAAGGCAGGCGGCAAAAGAGCTGGGGAAGAAAGCAATTTATTTAGGTGTACCTTTCATTGCTGAGTGGTTTAGAAACAAAGGGCACTTCATCAAATCCCAAGTTACAGCAGCTACAGGGGCCATTGCTCTGATCCAGCTGCAGGAGGATATGAAGAAGCAGCTAAGTCAAGAAGGGAACTACACTGAAGAAGAACTTGAAGAATACATGCAATCCCACAAGAAATTAATGATCGACTCATTGTGGAAGCTTAATGTAGCTGACATTGAGGCTACTCTATCTCGTGTCTGTCAAATGGTTCTCCAAGACAATAACGTCAGAAAAGAAGAACTCCGTGCACGAGCCAAGGGGTTGAAAACTCTTGGTAAAATCTTTCAGGGAGTGAAGTCAGCCGATGGAAATGAGAGTGAAAATGTACCAAATAAACCTGGAATACATAAATTGAATGGTAGTGAACCAAGCAGTGACTCTTGTTCTCCTGGTACATCTCAAAGAAGTTCAAGTACTGATTTTTCATCAATGACTGCCTCTGTGCCTCAGAGTCCCTATGTGGAGGCCCCTCAATTTGCAGGCTCTTACGTGGACTACCCTAGGCCAACAGCACCCCCCGGTGCCCAGAGACCTCCAATCAACAGGGATTGA 1203 0.4364 MVKETEYYDVLGVSPTATEAEIKKAYYMKARQVHPDKNPNDPNAAEKFQVLGEAYQVLSDPHQRQAYDTHGKSGISTDAIIDPAAIFAMLFGSELFEDYIGQLAMASMASMDIFSEGEQFDAKKLQEKMRVVQKEREEKLAEILKNRLNQYVQGNKSEFINHAKDEVSRLSNAAYGVDMLNTIGYIYARQAAKELGKKAIYLGVPFIAEWFRNKGHFIKSQVTAATGAIALIQLQEDMKKQLSQEGNYTEEELEEYMQSHKKLMIDSLWKLNVADIEATLSRVCQMVLQDNNVRKEELRARAKGLKTLGKIFQGVKSADGNESENVPNKPGIHKLNGSEPSSDSCSPGTSQRSSSTDFSSMTASVPQSPYVEAPQFAGSYVDYPRPTAPPGAQRPPINRD 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1283g00036 400 CDD DnaJ 6 60 IPR001623 -
Pral1283g00036 400 ProSiteProfiles dnaJ domain profile. 6 71 IPR001623 -
Pral1283g00036 400 Gene3D DnaJ domain 1 83 IPR036869 -
Pral1283g00036 400 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 2 325 - -
Pral1283g00036 400 FunFam Chaperone protein dnaJ 10 1 83 - -
Pral1283g00036 400 SUPERFAMILY Chaperone J-domain 2 101 IPR036869 -
Pral1283g00036 400 Pfam DnaJ domain 6 68 IPR001623 -
Pral1283g00036 400 Coils Coil 122 142 - -
Pral1283g00036 400 PRINTS DnaJ domain signature 8 26 IPR001623 -
Pral1283g00036 400 PRINTS DnaJ domain signature 26 41 IPR001623 -
Pral1283g00036 400 PRINTS DnaJ domain signature 43 63 IPR001623 -
Pral1283g00036 400 PRINTS DnaJ domain signature 63 82 IPR001623 -
Pral1283g00036 400 MobiDBLite consensus disorder prediction 316 400 - -
Pral1283g00036 400 MobiDBLite consensus disorder prediction 335 369 - -
Pral1283g00036 400 Pfam X-domain of DnaJ-containing 133 324 IPR026894 -
Pral1283g00036 400 ProSitePatterns Nt-dnaJ domain signature. 48 67 IPR018253 -
Pral1283g00036 400 SMART dnaj_3 5 63 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1283g00036 Pral-Chr1283 174436 180573 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1283g00036 7 70 C2H2 Transcription Factor Family AT1G74250 42.029 7.32e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1283g00036 - - vvi:100259812 650.203