Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1283g00023 ATGCAGGTTGAACAAGTGGCCCAACGTAGAGTCAACAAGCCCAGGTGGCTCGGGCCTATTCTGAAACAAACCTTCTTTGATTCTTGTGCAGCTCATCCTATGTACAAGAATGAACTTAACAAATACTGTATGACCTGCAACAAATCTGCTTGCCAATATTGTGTGTCTTTTGGTATTCATCGATGCCACAAAATGCTTAGCATTTATAAACATGTTTACAAATATGTTGTTGCCATGGCTGCTGTTGAAAAGCATATTGACTGTTCACAGATTCAGACCTACAAATGCAACAAACGATTGGTTATTGCTCTGAATCCTCTTCCACATGGCGGTTTGGCAACAGATACTGGACTATTATGTGAGATCTGTGGTAGGAGGGTGACTCACCCTCATCTGTATCGTTACTGCTCCATTTCATGCAAGGTTCAAGCTGTTTTAAGGAAGCCCAATGAATCACTCCCTCCCTTCATTACCATCCAGCGTCCTTCTAAGGGAAAGAAAGAGAAAGCCTCTGAGCCCCAGAAGCCTATAAACAAAAGAAAGGGAACACCCCGTAGGGCTCCCTTCTTCTAA 573 0.4328 MQVEQVAQRRVNKPRWLGPILKQTFFDSCAAHPMYKNELNKYCMTCNKSACQYCVSFGIHRCHKMLSIYKHVYKYVVAMAAVEKHIDCSQIQTYKCNKRLVIALNPLPHGGLATDTGLLCEICGRRVTHPHLYRYCSISCKVQAVLRKPNESLPPFITIQRPSKGKKEKASEPQKPINKRKGTPRRAPFF 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1283g00023 190 ProSiteProfiles Zinc finger B-box type profile. 29 68 IPR000315 GO:0008270
Pral1283g00023 190 CDD Bbox2 29 68 - -
Pral1283g00023 190 MobiDBLite consensus disorder prediction 162 179 - -
Pral1283g00023 190 Pfam PLATZ transcription factor 70 142 IPR006734 -
Pral1283g00023 190 SUPERFAMILY B-box zinc-binding domain 28 78 - -
Pral1283g00023 190 MobiDBLite consensus disorder prediction 156 190 - -
Pral1283g00023 190 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 7 188 - -
Pral1283g00023 190 Gene3D Classic Zinc Finger 22 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1283g00023 Pral-Chr1283 93217 95244 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Pral1283g00023 PLATZ 3.1e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1283g00023 - - qsa:O6P43_014262 259.225