Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1283g00014 ATGCCCTTACAAGGGATTGCCATCGAGCCCAGTTCCACATGTTCTCCTCCTGATCTTTCCCTTCACATAAGTCCTCCAACCACTTCTTCTTCTTCTTCAAATTTGGCAACTCAAGCTCGTACTGAGCTCTCTCTAGCTCCCAATTTCCGCACAGACCAATCTCTTTCTCATTATCATCATCATCATCATCACAATCACAACCCCACCATTAATGCTTCTGCCGCCACAAACTCTCACTTGAACCGCATGAATTCGTTCCTTGATGCGTCCTCCGACGTCGGCCTGAGACCCATCAAGGGGATCCCGGTGTATCACAACCACCGTTGCTTCCCTTTCTTGCCCGTCGACCATTCCACCGGAAAGGATCTTCATCATCACAAGATGTGGTTGCATCATCCCTTGCCCTCTAACACTTCTTTCTCTTCCTCTTCTTGGGCTTATAATAATAACAATACGATGGGAGCATCAGGATTGGATAATCCGATGTGGGTTTTAAACGGGTCGTCGCCTGCTAATTTCAAATCTCATCATCATCAGTTGCACTATGGGGTCGGGGTTGGGGCTTCTCATCATCGCAATGAAGAGGCCACATCCTCATCGGGGTTCATGAGATCCAGATTTATGATGCCTAAACTACCCTCCAGGAGAAGCATGAGAGCTCCTAGAATGCGTTGGACTACAACCCTCCATGCCAGATTCGTTCACGCCGTTCAGCTTCTTGGCGGCCATGAAAGAGCCACTCCAAAGTCAGTTCTGGAGCTGATGGATGTGAAAGATCTCACATTAGCTCATGTTAAAAGCCATTTGCAGATGTATCGAACAGTCAAGACCACTGACAAGCCTGCTGCTTCCTCAGGCCAATCAGATGGATCTGGTGAGGATGACATGTCCCCCGTCGGTGGCAACGCCGATCGTGGTGGTCTTCGCCAGTTTTCCAATCCAAGAGGCCGATCAGCAGATCGATCTCTGCAACAAGACGTAGACCATCCTTCTACTACTCTATGGAGTAATTCTTCAAGCAGAGAGCCATGGCCGCCACAGAATAATCCTTATGATATGGATGGTCTCAGAAAAACTGCCTTCCACTCACAACCGATGTCAAGAGGGCATCAAACTCAGGAATGTAATTCAAGGGAAGCACGAGTGCTAGTGAAGAACAGTTTGTCAGATGTTAATAGAGAATGCAAGAATCCATGCTTGGAGTTTACGTTAGGAAGACCAGATTGGAATGGTGGCAGAGGACAGGCCTAG 1251 0.4812 MPLQGIAIEPSSTCSPPDLSLHISPPTTSSSSSNLATQARTELSLAPNFRTDQSLSHYHHHHHHNHNPTINASAATNSHLNRMNSFLDASSDVGLRPIKGIPVYHNHRCFPFLPVDHSTGKDLHHHKMWLHHPLPSNTSFSSSSWAYNNNNTMGASGLDNPMWVLNGSSPANFKSHHHQLHYGVGVGASHHRNEEATSSSGFMRSRFMMPKLPSRRSMRAPRMRWTTTLHARFVHAVQLLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGQSDGSGEDDMSPVGGNADRGGLRQFSNPRGRSADRSLQQDVDHPSTTLWSNSSSREPWPPQNNPYDMDGLRKTAFHSQPMSRGHQTQECNSREARVLVKNSLSDVNRECKNPCLEFTLGRPDWNGGRGQA 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1283g00014 416 Pfam Myb-like DNA-binding domain 222 273 IPR001005 -
Pral1283g00014 416 SUPERFAMILY Homeodomain-like 218 274 IPR009057 -
Pral1283g00014 416 MobiDBLite consensus disorder prediction 315 346 - -
Pral1283g00014 416 MobiDBLite consensus disorder prediction 274 357 - -
Pral1283g00014 416 MobiDBLite consensus disorder prediction 1 39 - -
Pral1283g00014 416 MobiDBLite consensus disorder prediction 274 292 - -
Pral1283g00014 416 NCBIfam myb-like DNA-binding domain, SHAQKYF class 221 274 IPR006447 GO:0003677
Pral1283g00014 416 Gene3D - 220 277 - -
Pral1283g00014 416 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 17 411 IPR044847 GO:0000976|GO:0006355|GO:0010158
Pral1283g00014 416 FunFam Myb family transcription factor 219 277 - -
Pral1283g00014 416 MobiDBLite consensus disorder prediction 8 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1283g00014 Pral-Chr1283 55180 59159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1283g00014 1 409 G2-like Transcription Factor Family AT5G16560 42.058 5.89e-74 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pral1283g00014 Myb_DNA-binding 1.8e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1283g00014 - - ccaj:109796302 388.652