Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1277g00007 ATGTTCTTCAAACAAAGCCATCACCATCGTCGTCGTCTTCTTCTTCTTCTTGTTCTTTCAGTTTCTGTGGCCTCTGGTTTCCATGGAAACCAGCAAGCAAAAACCCAAGACAGGTTTCAGAAGCTAAAGTATTTGAGAGGCCAAAATGATAATAATATTTCAGGAATTGATAAGAGCCTTTTTGAAGCAGAAGATATTGATTTTGAAGTTCATGTTAATAAAGATCAAAAAGGGTTCAAGGAGAAAGATAGAATCCAGAAACTTCCAGGTCAACCTCCTGCTAGGTTTTCTCAGTATGGAGGGTATGTGACTGTGAATGAAGAAGCAGGACGAGCCTTTTATTATTATTTCACAGAAGCTTTTAGAAATAAGCAGAATTTGCCTCTCGTTCTCTGGCTTAATGGAGGGCCTGGATGTTCATCTCTTGCTTATGGAGCCATGCAAGAACTTGGACCCTTCAGAGTCAACAGTGATGGCAAAACCCTTTTCAAAAACAGATATTCATGGAACCATGCTGCAAATGTATTGTTCTTGGAGTCACCAGCTGGAGTGGGATTTTCATATTCAAACAAAACATCAGATTATGAAAACAATGGCGACCAAAGAACAGCTTCAGATAATTATATCTTCTTGTTGAATTGGTTGGAGAGGTTTCCTGAATATAAGAACAGAGATTTCTACATCACTGGAGAAAGCTATGCTGGCCACTATGTTCCTCAACTTGCTCAAACGATTCTCCAACATAACATCAAAGCCAACAACACCATCATCAACCTTAAAGGAATCATGATAGGGAACGCAGCGATAAATGATGAGACAGATGATAAAGGAATGTACGATTTCCTAGGAAGTCATGCGATAATGTCGGATTCAACAGTTTCAACAATTGACAAGTTCTGTGATTTCTCTGCAAATGCCCAAAATCAACCTAAACAGTGCAATGAAGCTTTGGAGGAAGTAGACAGAGATTCTTACTATATTGATATCTACAACATCTATGCCCCTATCTGCAACAACCCTAATCTCACAGCCACTCCCAACCCCACTTCTATTGTTTTGGACGCATGTAATGAATATTATGTGATAGCGTATATGAATAAAGAAGAAGTTCAAGAGGCACTTCATGCAAATGTGACAAAGGTGAAGTACGAGTGGGCACCTTGCAGTGATGTGATTTCAGGTTGGCATGATAGCCCTTCTTCCACTCTTCCAATCCTACGTCAACTCATGGACCATGGAATTAGGGTTTGGATTTTCAGTGGAGACACAGATGGAAGAGTGCCAGTGACTTCAACACAATACTCTCTCAACTCTATGAATATGAAAGTCAACACTCCATGGCATCCTTGGTACTTCAATGGACAGGTTGGAGGGTACACCCAAGTGTACAAGGGAGATTTAACATTTGCAACAGTGAGGAACGCAGGGCATCAAGTGCCAAGCTACCAGGCAGCAAGATCCCTTTCATTGTTCAGACACTTCTTAGATGGCACTCCTCTTCCTGATACTACCAGATATTAA 1521 0.407 MFFKQSHHHRRRLLLLLVLSVSVASGFHGNQQAKTQDRFQKLKYLRGQNDNNISGIDKSLFEAEDIDFEVHVNKDQKGFKEKDRIQKLPGQPPARFSQYGGYVTVNEEAGRAFYYYFTEAFRNKQNLPLVLWLNGGPGCSSLAYGAMQELGPFRVNSDGKTLFKNRYSWNHAANVLFLESPAGVGFSYSNKTSDYENNGDQRTASDNYIFLLNWLERFPEYKNRDFYITGESYAGHYVPQLAQTILQHNIKANNTIINLKGIMIGNAAINDETDDKGMYDFLGSHAIMSDSTVSTIDKFCDFSANAQNQPKQCNEALEEVDRDSYYIDIYNIYAPICNNPNLTATPNPTSIVLDACNEYYVIAYMNKEEVQEALHANVTKVKYEWAPCSDVISGWHDSPSSTLPILRQLMDHGIRVWIFSGDTDGRVPVTSTQYSLNSMNMKVNTPWHPWYFNGQVGGYTQVYKGDLTFATVRNAGHQVPSYQAARSLSLFRHFLDGTPLPDTTRY 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1277g00007 506 Gene3D - 356 392 - -
Pral1277g00007 506 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 84 483 IPR001563 GO:0004185|GO:0006508
Pral1277g00007 506 FunFam Carboxypeptidase 79 339 - -
Pral1277g00007 506 Pfam Serine carboxypeptidase 90 497 IPR001563 GO:0004185|GO:0006508
Pral1277g00007 506 ProSitePatterns Serine carboxypeptidases, histidine active site. 467 484 IPR033124 GO:0004185
Pral1277g00007 506 FunFam Carboxypeptidase 402 497 - -
Pral1277g00007 506 PRINTS Carboxypeptidase C serine protease (S10) family signature 178 188 IPR001563 GO:0004185|GO:0006508
Pral1277g00007 506 PRINTS Carboxypeptidase C serine protease (S10) family signature 467 480 IPR001563 GO:0004185|GO:0006508
Pral1277g00007 506 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 177 IPR001563 GO:0004185|GO:0006508
Pral1277g00007 506 PRINTS Carboxypeptidase C serine protease (S10) family signature 214 239 IPR001563 GO:0004185|GO:0006508
Pral1277g00007 506 Gene3D - 402 497 - -
Pral1277g00007 506 Gene3D alpha/beta hydrolase 79 339 IPR029058 -
Pral1277g00007 506 SUPERFAMILY alpha/beta-Hydrolases 85 501 IPR029058 -
Pral1277g00007 506 ProSitePatterns Serine carboxypeptidases, serine active site. 228 235 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1277g00007 Pral-Chr1277 93060 97978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1277g00007 364 500 Calmodulin-binding Proteins AT2G22960 32.847 1.96e-18 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1277g00007 K16297 - qsa:O6P43_029594 680.248