Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1275g00001 ATGAATGGTGCCGCACACCTCGAACCAGATGGCTCCGAATTTGTCGAAGTTGATCCCACCGGCAGATATGGCAGATACAATGAAATTCTCGGCAAGGGAGCTTCAAAGATAGTATATAGAGCATTTGATGAATATCAAGGTATTGAAGTTGCCTGGAACCAAGTCAAGCTGTATGATTTCCTACAAAGCCCTGAAGATCTTGAGAGGCTCTACTGTGAAATTCATCTACTGAAAACATTGAAGCACAAAAACATCATGAAATTTTATACGTCTTGGGTCGATACTGCTAATAGGAATATCAATTTCGTGACTGAGATGTTCACTTCTGGTACTCTTAGGCAGTATAGGCTCAAGCACAAAAGAGTAAACATAAGAGCGGTAAAGCATTGGTGTAGACAGATCCTGAGAGGACTTCTCTATCTCCATAGCCATGACCCGCCTGTGATTCATAGAGATCTCAAATGTGATAATATTTTTGTCAATGGACACCAAGGCGAAGTGAAGATTGGTGATCTTGGTCTGGCAGCAATTCTACGGAAATCCCAGGCTGCACATTGTGTCGGAACGCCCGAGTTTATGGCCCCAGAAGTGTATGAAGAGGCATATAATGAATTAGTTGATATATATTCTTTTGGCATGTGCATACTTGAAATGGTCACATTTGAATATCCTTATAGTGAGTGTACTCATCCAGCGCAAATCTACAAGAAAGTCATTTCTGGGAAAAAACCAGAGGCTTTATATAAAGTCAAGGATCCAGAAGTGAGACAGTTTGTTGAGAAATGCTTGGCAACTGTGTCTCTGAGGCTCTCTGCAAGAGAGCTTCTAGATGATCCTTTCCTCCAGATTGATGATTACGAATCATTATTAAGGCCAGCAGACAGTGGGGAATTTGATGACATGGTTCCTCTCATCCGACACCCATTCTATGATTTTCATCGAAGTTACAGTAATGTCAGTAATGAATACTCTAACGGATATGGCTATGATGGAGAGTGGTTTCCTCATCCAACTGAGATTGAACATACTGGAATTGAACTCTTTCAATACCAGGATGATGAACCCGCTGAAGATGTTGATATAAGCATCAAAGGCAAGAGGAACGATGATGGGGGCATCTTTTTAAGACTAAGAATTGCAGATAAAGAAGGGCATATTCGAAATATTTATTTCCCATTTGACGTAGAGACCGATACAGCCTTAAGCGTGGCCACTGAAATGGTCGCAGAACTTGACATGACTGATCAGGATGTAACCAGAATAGCGGATATGATAGATGGGGAAATTGCTTCCTTGGTACCTGAATGGATGCCAGGGCCAGGAATTGAGGAAACTCCTCGTTTTGCAAGTCAAAGTTTCTGCCACGACTGCGCATCTAATCGTACATCCAGTGGTTCCCTTGCGGATTTTCTGTCACATAGCTCGGGCACCAAGAACACGCAATTTCTTCAGTGCTGTAGGCATAAATGTGCTTTAATGCATGGGCGGTTTGAGGAGATCACATTTGACTCTGACGAGTGTGAAAATCATGTTAGAGAGAATGCTGATGCACCTAAGATGTCAAGTCAATCAGATTGTCTGCAGTATCGGGAGTTGTGGAACCAGCATGAAAGTCGTGAACTTAGTCCCATAGAATCTGAAAGAAGCCACTCTGATGAACAAAATGAACAGTTAGATAAATATGTATCAGCTGAAGGTCAGCGATATGATGCTTGGGATTACAAGTTCGCAACCGATGTAGGAAATTCCCACCGGAACGTATCAGGAACGAATTATTTTCCCCCAACTGGTTCGTTTTATTGTGATCTTGAGGAAGAAGGTGATAAGGAGATCCAGCAGGAGCTAAGATGGCTCAAAGCAAAGTACCAAATGGAGCTAAGGGAGCTCAGGGATCGACAGCTTGGGATAACAGTAAAATCTTCGCATGCCAGGGAGCACAAATCAGAATGCGGAGTATCATCACCTTCACAAACAGACACTTTTGAAAGAGGAAACAGTTTGAAACCCTTTGCTAATTGTGGTTCCAGTTGCCACTCTCACTTCAATAAGAGCAGCCCCAATTCGGACACCCAAAGGGCCCGAAATTGTGAGGCGATGGATTCTCCTGGAGGTGAGGTTACTGCAAAGAGTTTATGCACAGGCTTATTGCTTCCCCACTCCCTACACAGGACTGTTTCCCTCCCAGTTGATGCGGTTGATATATAA 2205 0.4304 MNGAAHLEPDGSEFVEVDPTGRYGRYNEILGKGASKIVYRAFDEYQGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKHWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGHQGEVKIGDLGLAAILRKSQAAHCVGTPEFMAPEVYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVISGKKPEALYKVKDPEVRQFVEKCLATVSLRLSARELLDDPFLQIDDYESLLRPADSGEFDDMVPLIRHPFYDFHRSYSNVSNEYSNGYGYDGEWFPHPTEIEHTGIELFQYQDDEPAEDVDISIKGKRNDDGGIFLRLRIADKEGHIRNIYFPFDVETDTALSVATEMVAELDMTDQDVTRIADMIDGEIASLVPEWMPGPGIEETPRFASQSFCHDCASNRTSSGSLADFLSHSSGTKNTQFLQCCRHKCALMHGRFEEITFDSDECENHVRENADAPKMSSQSDCLQYRELWNQHESRELSPIESERSHSDEQNEQLDKYVSAEGQRYDAWDYKFATDVGNSHRNVSGTNYFPPTGSFYCDLEEEGDKEIQQELRWLKAKYQMELRELRDRQLGITVKSSHAREHKSECGVSSPSQTDTFERGNSLKPFANCGSSCHSHFNKSSPNSDTQRARNCEAMDSPGGEVTAKSLCTGLLLPHSLHRTVSLPVDAVDI 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1275g00001 734 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 374 427 IPR024678 GO:0004674|GO:0005524
Pral1275g00001 734 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1275g00001 734 Coils Coil 612 632 - -
Pral1275g00001 734 FunFam probable serine/threonine-protein kinase WNK9 107 286 - -
Pral1275g00001 734 Gene3D - 371 436 - -
Pral1275g00001 734 SUPERFAMILY Protein kinase-like (PK-like) 27 282 IPR011009 -
Pral1275g00001 734 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Pral1275g00001 734 FunFam Probable serine/threonine-protein kinase WNK1 9 105 - -
Pral1275g00001 734 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1275g00001 734 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 12 649 - -
Pral1275g00001 734 CDD STKc_WNK 22 281 - -
Pral1275g00001 734 Gene3D Transferase(Phosphotransferase) domain 1 107 286 - -
Pral1275g00001 734 FunFam probable serine/threonine-protein kinase WNK9 371 455 - -
Pral1275g00001 734 Gene3D Phosphorylase Kinase; domain 1 9 105 - -
Pral1275g00001 734 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1275g00001 Pral-Chr1275 4812 8390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1275g00001 1 500 MAP Kinase Kinase Kinase AT3G22420 57.459 0.0 595
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pral1275g00001 Pkinase 1.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1275g00001 K08867 - gmx:100775959 1177.16