Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1271g00004 ATGCTCATGGGCAATGCTGAACCCGCTACCGGGCAAGCGAGGCCTTGGTTTTCAGCAACGCTGGTTTTCCTCAAAAGTGATCTAGGACTCCCTGAGGGAAAGTTAGGATTTGCTTACGAGCAAACGAGGACATTTCACCTCTGGATGGCTCACCAGGACATGGCCCCTGATGCTGCTTCGTCCTCTGCCTCTGCTAAATTTTCCATCAAGAAATATGATGTTTTCATCAGCTTTAGGGGTGAAGACACTCGTGCCAACTTCACGAGCCATCTTTATGAAGCGTTCTGCAGGAAGAAAATAAGAACATACATAGACTCCAAACTTCCCAAAGGAGATGAGATCTCAGCTGCACTTACGCAAGCAATCAAGGATTCCTACGCCTCTGTTGTGGTATTCTCAGAAAATTATGCTTCTTCAAGATGGTGCTTGGATGAACTCACCCACATACTTCATTGCAAAAGGGTTCAAGAACAGATTGTTATTCCAGTATTTTATAAAGTTGAGCCCTCTCATGTGAGAAATCAGACTGGCCTTTACAAGCAAGCATTTGAGACCTATGAGAGAGACGTCAAGGTCAACCAACACAAGGTGCAAATGTGGAAGCATGCGCTCAATGAAGCTGCAAACTTAGCTGGTTATGACTCACACACTTTCAGGGATGAATCTGAACTGATTCAAAAGACTGTCAAAGACATATTGCAGAAGTTGAGTCACAAATATCCACCTGCTGATTTGAAAGCACTTGTCGGTATTGATGAAAAGTGCAGGGAGATTGAATTATTGTTAAGAGATTTTGAAACCATTGGAATTTGGGGCATGGGGGGTATTGGCAAATCAACCGTTGCCAAAACTATATTTGTCAAATACTCTTCCCATTATGAAGGCTCTTGCTTCTTGGAAAATGTAAGAGAAAAGTCTGAAAATGGACTTGCTGAATTACGTTATAAGTTTATCTCCTGTTTATTAAAGGAAGAAGATACTTGTACTGATCCTTTAACAACTTTTGTTCTATCTAGACTTAGTCGTATGAAAGTTTTTGTTGTTCTTGACGATATCAGTACTGTGGAGCAATTAGAATATTTGGTGGGAGAACCATTTTGCTTTGGGCTGGGAAGTAAAATTCTCATCACAACTAGGGACAAGCATGTGCTTAGCAAAGGAGTTGATGAAATATATAAGGTTAAGGAATTGGACTTCCACCAATCCCTTAAACTTTTCAGCTTGAATGCCCTCAACACTAGCCTGCCGATAATGGGATATGAAGAACTAACAAAAAGGGCAGTTGCTTATGCAAAAGGAATTCCATTGGCTTTAAAAGTTTTGGGTTCATATCTCCGTGGCAAAAGTGAGGTTGAATGGAATAGTGCATTGAGAAAACTTGAGAAGACTCCCCATGAAAACATTCAAAGAGTGTTGAGATTGAGTTATGATGGACTGAATCATGAAGAAAAGAACATATTTCTAGAGATTGCATGCTTTTTGAAGGGAATGTTGAAAGAACATGTGATCAGCCTATTGGATTGCTACAACTTCTATGGAGCTATTGGCATAAGAACACTTCATGATAAGGCTCTCATAAATGCAAATGATCACATGCCTGTAGAGATGCATGATTTGATACAAGAAATGGGGTGGGAAATTGTTCGTGAAGAATCTATCAATGAACCCGGAAGACGGAGTCGATTATGGGATTGTGAAGAAATCTATGATGTTTTGGCTAATAACAAGGGGACTGATAAACTTGAAGGCATAATGTTAGATGTGTCTCGAATCAAAGATATACATTTGAACGCCGACACTTTCAAAAGGATGTCTAATCTGCGATTTCTTAAATTTTATTCTGATTTAAACCATCGCTCAAGTCATGTATATTTACCAAAAGTTCTTGAGTTTTTTCCTAGCAAAATAAAGTATCTAGAGTGGTATGGATACCCACTTAAATCTCTGCCACCAACTTTTCGTCCTGAAAATTTGGTTGAGCTTCACATGCCAAATAGCCACGTTCAAAAGCTTTGGAATGGAATTCAGGATCTCGTGAATTTAGAAGAGATAAACCTTAGCGGATGCAAACGGTTGAAGGAGCTGCCAAATTTCTCTAAAGCCTTAAATCTGAAAGTAGTATCTCTTGTTGATTGTGAAAGTTTGCAATATGTTCATTCTTCTATTTTGTCTCTCCACTCGCTTGTTGAATTGGACTTATGCCGGTGCAAGAGACTGAGGAAACTGAAAACTAAGTTTCATTTAAAATCTCTACAATACATTCGAGTGGATGAGTGCATCAGTCTCAAGGAATTTTCAGTGTCATCAGAAAAAATAAAGGAGTTGAATCTGTGTCACACAGGAATCGAAAATTTGCACTCGTCCATAGGGCATTCAAGTAATCTGGAAGTGCTGGATCTGTTTGGCTTAAGACTGAAGAAAATTCCAAAGCAGTTATCGTGCTTGAGAACATTGACAATGCTCAGGCTTCCTAATTGTGAACTGCTTGATAATTCGATGCTACATATGTTATTTGGGGGCATGTTGTCTCTAACTGTAGTATATTTGACAGATTGTAGTCACATAACTGAACTTCCCAACAACACAGAACATCTTTTAAGGTTGGAATGTCTCTTCTTATCGAACTGCAGGAAGCTTCGTTCTTTACCAAAACTTCCACCATCCATTGCAACCTTAGATGCCTACAACTGCATGTCATTAGAGATAGTGTCAACCTTTAGACCACTGCACAGGAGTGAAAAATACTTCTCATTTATGAATTGCGTGAAACTGAATGAACAACTCAGAGAAATCATGTTATGTTGCCCTAAACTGTGCGTGCTACTTGGGAGGTTTTAA 2838 0.3943 MLMGNAEPATGQARPWFSATLVFLKSDLGLPEGKLGFAYEQTRTFHLWMAHQDMAPDAASSSASAKFSIKKYDVFISFRGEDTRANFTSHLYEAFCRKKIRTYIDSKLPKGDEISAALTQAIKDSYASVVVFSENYASSRWCLDELTHILHCKRVQEQIVIPVFYKVEPSHVRNQTGLYKQAFETYERDVKVNQHKVQMWKHALNEAANLAGYDSHTFRDESELIQKTVKDILQKLSHKYPPADLKALVGIDEKCREIELLLRDFETIGIWGMGGIGKSTVAKTIFVKYSSHYEGSCFLENVREKSENGLAELRYKFISCLLKEEDTCTDPLTTFVLSRLSRMKVFVVLDDISTVEQLEYLVGEPFCFGLGSKILITTRDKHVLSKGVDEIYKVKELDFHQSLKLFSLNALNTSLPIMGYEELTKRAVAYAKGIPLALKVLGSYLRGKSEVEWNSALRKLEKTPHENIQRVLRLSYDGLNHEEKNIFLEIACFLKGMLKEHVISLLDCYNFYGAIGIRTLHDKALINANDHMPVEMHDLIQEMGWEIVREESINEPGRRSRLWDCEEIYDVLANNKGTDKLEGIMLDVSRIKDIHLNADTFKRMSNLRFLKFYSDLNHRSSHVYLPKVLEFFPSKIKYLEWYGYPLKSLPPTFRPENLVELHMPNSHVQKLWNGIQDLVNLEEINLSGCKRLKELPNFSKALNLKVVSLVDCESLQYVHSSILSLHSLVELDLCRCKRLRKLKTKFHLKSLQYIRVDECISLKEFSVSSEKIKELNLCHTGIENLHSSIGHSSNLEVLDLFGLRLKKIPKQLSCLRTLTMLRLPNCELLDNSMLHMLFGGMLSLTVVYLTDCSHITELPNNTEHLLRLECLFLSNCRKLRSLPKLPPSIATLDAYNCMSLEIVSTFRPLHRSEKYFSFMNCVKLNEQLREIMLCCPKLCVLLGRF 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1271g00004 945 Gene3D - 69 234 IPR035897 -
Pral1271g00004 945 Pfam TIR domain 71 250 IPR000157 GO:0007165
Pral1271g00004 945 Pfam NB-ARC domain 263 473 IPR002182 GO:0043531
Pral1271g00004 945 FunFam Disease resistance protein (TIR-NBS-LRR class) 68 238 - -
Pral1271g00004 945 Gene3D - 235 394 IPR027417 -
Pral1271g00004 945 Gene3D Ribonuclease Inhibitor 572 745 IPR032675 -
Pral1271g00004 945 Gene3D Ribonuclease Inhibitor 746 902 IPR032675 -
Pral1271g00004 945 SUPERFAMILY L domain-like 584 922 - -
Pral1271g00004 945 SUPERFAMILY "Winged helix" DNA-binding domain 467 572 IPR036390 -
Pral1271g00004 945 Pfam Leucine Rich Repeat 657 676 IPR011713 -
Pral1271g00004 945 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 233 488 IPR027417 -
Pral1271g00004 945 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 72 765 IPR044974 GO:0006952
Pral1271g00004 945 PRINTS Disease resistance protein signature 267 282 - -
Pral1271g00004 945 PRINTS Disease resistance protein signature 339 353 - -
Pral1271g00004 945 PRINTS Disease resistance protein signature 431 445 - -
Pral1271g00004 945 PRINTS Disease resistance protein signature 723 739 - -
Pral1271g00004 945 Gene3D - 397 480 IPR042197 -
Pral1271g00004 945 SMART till_3 71 210 IPR000157 GO:0007165
Pral1271g00004 945 SUPERFAMILY Toll/Interleukin receptor TIR domain 70 213 IPR035897 -
Pral1271g00004 945 ProSiteProfiles TIR domain profile. 70 236 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1271g00004 Pral-Chr1271 2037 7008 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1271g00004 68 905 WRKY Transcription Factor Family AT4G12020 33.643 1.38e-113 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1271g00004 - - pcin:129288061 1445.25