LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral1269g00013	ATGGCATCGGCTTCTCCTTCTCCCAATTCTTCTCCCTCTGCAGTGCCACCAACTTCTGCGAATAATACAGCACCACCACCTTCTTCACCTTCATCGACAAATTCTTCTAAGACCCCTCCTCCTTCATCTCCTAACCCTTCAGCTACGCCTCCTGCTCAGGCAGTGCCTTCAACCCCGCCTCCCTCTCCGTCTCTGTCTCCTCCGCCGCCATCACCGCCGGCATCTCCTCCACCTTCTCCTGCCAGAGCTCCTCCTCCAATTGCAACCTCACCTACCCCTCCTAGTTTATCCCCACCACCTCCATTGGCTGCTCCACCACCAGATTCTTCACCTCCTCCTGCAGAAAATCCACCCCCCTCACCTATTTCTCCAATTCTTCCTCCTCCAGCTCATAACTCAACGCCGCCACCGTCTGGTAATCCTTCTTCATCAGGAGGAAAGCCACCGAAAAGTCCTGCTTCAAGCCCTTCACTTGCACCACCTCCATCACTTTCTAAGTCTCCTCCCTCCACAAATGCTACCCCTCCTTCCAAAACACCTTCAACTCCTTCAGTCCCTCCTCCAAAGTCTTCACATGCATCTCAATCTTCCTTTCCAACGGCGTCGCCTACTGGTAAATCATCCAATCATAGAAATACATCGGCAAACAACGCACCTCCACAGCCAGGAGGTTCAAATACTGGACTATTCACAGTTATTGGCATTATATTTGGCTTTGTTGTCCTCAGCCTTCTTGTTATGGCGATTTGGTTTGTATGGAGGCGGAAGAGGAAGGAAGCAAGATGGAAAGTTGGTTACAATATGCCTTCCCCTTATGCCTCATCTCATAACTCAGGCACAACGTTCTTAAGGCAACAGTCTTCCCTTTCTCCTAAGGATTGTGGTAGTGATTTCGTGTATTCACCCTCAGAACCAGGTGGACTAAGTGGTTCAAGATCTTGGTTTGCGTATGACGAACTTGTCCAAGCAACAGATGGGTTTTCGGCACAAAACCTGTTGGGTGAAGGTGGATTTGGTTGTGTCTACAAAGGCTTTCTCATGGATGGAAGAGCAGTGGCTGTGAAACAGCTCAAAGATGGAGGCGGGCAAGGGGAGCGTGAGTTTAGAGCAGAAGTTGAAACTATTAGCCGAGTACATCATCGCCACCTTGTTTCCTTGGTGGGCTACTGTATATCTGAGCATCAGAGATTGCTTGTCTATGACTACGTTCCCAACAATACCCTTCATTACCATCTCCATGGTCAAAACGGGCCAGTTATGGATTGGGCTACAAGAGTGAAGGTTGCAGCTGGTGCAGCTCGTGGAATAGCTTACCTACATGAAGACTGCCATCCCCGCATTATTCACCGAGACATAAAGTCATCAAACATCCTTCTTGATAACAAATTTGAAGCTCAAGTTTCCGACTTTGGGCTTGCAAAATTAGCAATGGATTCATATACACATGTAACCACACGAGTCATGGGGACCTTTGGGTACATGGCACCTGAATATGCAACAAGTGGTAAACTGACTGAAAAGTCAGACGTTTATTCTTTTGGGGTTGTGCTTTTGGAGCTGATTACAGGTCGGAAGCCTGTGGATACCTCTCAGCCCACCGGTGATGAGAGCCTGATTGAATGGGCTCGACCACTATTGAATCAAGTGCTTGAAAATGAAGACTATGATATACTGGTAGATCCACGACTCGAGAAGAACTATAATAGAAATGAAATGTTTCGGATGATAGAGGCTGCGGCTGCCTGTGTGCGTCATTCTGCCGCAAAAAGACCACGAATGAGTCAGGTCGCAAGAGCTTTGGATTCAATAGATGAGTTTTCCGATCTCTGCAACGGAATAAAACCTGGCCAGAGTACAACCTTTAATCCTTCACCACCATCCGCTCAAGTCAGAATGTTTCAAAAGATGATTTTCGGTGGGGCCAGTCAAGATTTCAGTTCCAGTTTCTTTAACGATTCTCAGAGTAGCTGGAGAAGCAGAGAACAGGAGGACTCAAAACACCATGATCTCCCAAAATAA	2019	0.4765	MASASPSPNSSPSAVPPTSANNTAPPPSSPSSTNSSKTPPPSSPNPSATPPAQAVPSTPPPSPSLSPPPPSPPASPPPSPARAPPPIATSPTPPSLSPPPPLAAPPPDSSPPPAENPPPSPISPILPPPAHNSTPPPSGNPSSSGGKPPKSPASSPSLAPPPSLSKSPPSTNATPPSKTPSTPSVPPPKSSHASQSSFPTASPTGKSSNHRNTSANNAPPQPGGSNTGLFTVIGIIFGFVVLSLLVMAIWFVWRRKRKEARWKVGYNMPSPYASSHNSGTTFLRQQSSLSPKDCGSDFVYSPSEPGGLSGSRSWFAYDELVQATDGFSAQNLLGEGGFGCVYKGFLMDGRAVAVKQLKDGGGQGEREFRAEVETISRVHHRHLVSLVGYCISEHQRLLVYDYVPNNTLHYHLHGQNGPVMDWATRVKVAAGAARGIAYLHEDCHPRIIHRDIKSSNILLDNKFEAQVSDFGLAKLAMDSYTHVTTRVMGTFGYMAPEYATSGKLTEKSDVYSFGVVLLELITGRKPVDTSQPTGDESLIEWARPLLNQVLENEDYDILVDPRLEKNYNRNEMFRMIEAAAACVRHSAAKRPRMSQVARALDSIDEFSDLCNGIKPGQSTTFNPSPPSAQVRMFQKMIFGGASQDFSSSFFNDSQSSWRSREQEDSKHHDLPK	672

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral1269g00013	672	Gene3D	Transferase(Phosphotransferase) domain 1	403	611	-	-
	Pral1269g00013	672	SMART	serkin_6	327	607	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral1269g00013	672	Pfam	Protein tyrosine and serine/threonine kinase	330	599	IPR001245	GO:0004672\|GO:0006468
	Pral1269g00013	672	SUPERFAMILY	Protein kinase-like (PK-like)	306	600	IPR011009	-
	Pral1269g00013	672	ProSiteProfiles	Protein kinase domain profile.	327	607	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral1269g00013	672	MobiDBLite	consensus disorder prediction	1	18	-	-
	Pral1269g00013	672	PANTHER	PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4	241	647	IPR047117	-
	Pral1269g00013	672	MobiDBLite	consensus disorder prediction	657	672	-	-
	Pral1269g00013	672	MobiDBLite	consensus disorder prediction	153	187	-	-
	Pral1269g00013	672	MobiDBLite	consensus disorder prediction	32	136	-	-
	Pral1269g00013	672	MobiDBLite	consensus disorder prediction	137	151	-	-
	Pral1269g00013	672	FunFam	proline-rich receptor-like protein kinase PERK8	403	615	-	-
	Pral1269g00013	672	MobiDBLite	consensus disorder prediction	188	223	-	-
	Pral1269g00013	672	MobiDBLite	consensus disorder prediction	651	672	-	-
	Pral1269g00013	672	ProSitePatterns	Protein kinases ATP-binding region signature.	333	355	IPR017441	GO:0005524
	Pral1269g00013	672	MobiDBLite	consensus disorder prediction	1	223	-	-
	Pral1269g00013	672	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	447	459	IPR008271	GO:0004672\|GO:0006468
	Pral1269g00013	672	Gene3D	Phosphorylase Kinase; domain 1	307	402	-	-
	Pral1269g00013	672	FunFam	Proline-rich receptor-like protein kinase PERK8	300	402	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral1269g00013	Pral-Chr1269	131929	138587	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral1269g00013	199	662	Trihelix Transcription Factor Family	AT5G38560	67.797	0.0	659

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_PERK-1	Pral1269g00013		PK_Tyr_Ser-Thr	3.1e-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral1269g00013	-		-	gmx:100784873	715.687