Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1262g00001 TATTTTTTTTCAATAATCTCAATCTCATCATCTACTTCTGAAAAACCCTACCAAGATGCGAACACACACTTCATCAGAACATCTTGTAATTCCACAGCCTACCCAAGGCTCTGCTTTGCCTCCTTATCAAAGCACGCTGGCTTCATACAAACCAACCGCGTCCTCCTGACCAGTGCCGCCCTGAACGTGACTCTGGCGTCGGCAAAGGCGACGTCGGTGATGATTTCGACGATGTCCAAGAGCTATGGGATAATGAAGCCAAGGGAGGCCGCGGCGATGAGAGATTGCCTGGAGGAGCTGCGTGACTCGGTGGATGAACTCAGAAAGTCCATTGGTAAGATGAGTCAACTCGGAGACTCCAACTTTGAGGTCACCATGAATGATGTTCAGACCTGGGTTTCTGCTGCTTTGACTGATGAGAGTACTTGCACTGATGGGTTTCAAGGAGTTAATGGAAATTTGAAGAACACTGTGAGAAGCCGAATTGTGCAGGTGGCTCAACTTACCAGTAATGCTTTGGCTTTCATAAATCAGCTTGCTTCTTCTCATGCTTAA 555 0.4721 YFFSIISISSSTSEKPYQDANTHFIRTSCNSTAYPRLCFASLSKHAGFIQTNRVLLTSAALNVTLASAKATSVMISTMSKSYGIMKPREAAAMRDCLEELRDSVDELRKSIGKMSQLGDSNFEVTMNDVQTWVSAALTDESTCTDGFQGVNGNLKNTVRSRIVQVAQLTSNALAFINQLASSHA 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1262g00001 184 SMART PMEI_2 20 175 IPR006501 GO:0004857
Pral1262g00001 184 PANTHER PECTINESTERASE INHIBITOR-LIKE 3 175 - -
Pral1262g00001 184 FunFam Pectinesterase inhibitor 3 20 180 - -
Pral1262g00001 184 Coils Coil 90 117 - -
Pral1262g00001 184 Gene3D Invertase/pectin methylesterase inhibitor family protein 19 181 IPR035513 -
Pral1262g00001 184 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 23 179 IPR035513 -
Pral1262g00001 184 NCBIfam pectinesterase inhibitor domain 3 179 IPR006501 GO:0004857
Pral1262g00001 184 CDD PMEI-like_3 27 181 - -
Pral1262g00001 184 Pfam Plant invertase/pectin methylesterase inhibitor 24 174 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1262g00001 Pral-Chr1262 20072 20932 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1262g00001 2 174 Carbohydrate Esterase AT5G53370 31.073 4.96e-20 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1262g00001 - - gmx:100305537 246.899