Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1259g00001 ATGGCCAAACCATTTTCACCAACTATAGAGTTCACTGTGAGGAGGTGCCAACCAGAGCTGGTGGCTCCGGCCAAGCCTACCCCTCATGTGGTTAAGTTACTCTCTGACATAGATGACCAAGCATCTCTAAGATTTCAAATTCCATTATTCTTCTTTTATCCTCACAAGCCTTCCATGGCAAGAAAGGACCCTGCTAAGCTTATAAAAAAAGCACTCGCTAAAACCCTAGTCTTTTACTATCCTTTTGCAGGTCGACTTAGGGAAGGGCCTGGTCGCAAACTTATGGTAGATTGTAATGAAGAAGGAGTCATTTTCATTGAAGCTGATGCAGATGTTTCTCTTCACCAATTTGGTGACCCTCTTAAACCTCCATTCCCTTGCTTTGAAGAGCTTCTTTATAATGTCCCTGGTTCAGAAGGAGTCACTAATTGTCCCCTCTTACTCATACAGGTTACACGTCTGAAGTGTGGTGGATTCATTTTCGCTCTTCGCTTAAACCACACTATGAGTGATGGTGCTGGTCTTGTTCAGTTCCTCAAGGCTTTAGCTGAGATAGCACAAGGTGCTTGTGAACCTTCAATCCCTCCAGTTTGGCGCAGAGAGTTACTAATTGCGAGGGACCTACCTCGTATTACATGCAGCCATACCGAGTACGATGAAGTGCCAAATGATGACGATGATGAAACAAGAAACGAAGACATGGTCTACGATTCTTTCTTCTTTGGTCCTAACCAGTTAAAAGCCATTCATCGATTGTTCCCTCATCACCAACATCATCAAAACTCTACCTTTGAAGTACTCACAGCATTCATATGGCGTTGTCGCACCATAGCTTTACGGCTCGAACCACACAAGGAGGTTCGTTTCATGGCCACTAGAAATGTAAGGGGTATACAGTCGAACCCTCCATTGCTACCATCGGGTTATTACGGCAACGGTTTCGTGTTCCCGGCCGTCGTCACCACCGCCGGAAAACTCTGCAGAAACTCATTTGGGTATGCTTTAGAGCTGGTCAAGAAATCAAAAGCTATGGCAACAGTAGAGTACATACAATCTGCAGCAGATCTCATGGTGATTAAAGGACGGCCTAGTCTTACTCCCTTAAGGGCTTGGGCTGTGTCTGATGTAACCCGTGCTGGTTTTGAAGACGTTGATTTTGGTTGGGGTAAGGCAATATATGGTGGACCAGCAATGCCTGGTGCTGGAGACTTCCTTGGAGCAAGCTTCTTTGTTCCACATAAGAATGCAAAAGGAGAAGAAGGCATTGTCGTACCAATTTTCTTGCCACGCAAATCTATGATGATATTTATGAAAGAGTTAGAGAACAACATGATAATTAGCAAACTATGA 1350 0.4444 MAKPFSPTIEFTVRRCQPELVAPAKPTPHVVKLLSDIDDQASLRFQIPLFFFYPHKPSMARKDPAKLIKKALAKTLVFYYPFAGRLREGPGRKLMVDCNEEGVIFIEADADVSLHQFGDPLKPPFPCFEELLYNVPGSEGVTNCPLLLIQVTRLKCGGFIFALRLNHTMSDGAGLVQFLKALAEIAQGACEPSIPPVWRRELLIARDLPRITCSHTEYDEVPNDDDDETRNEDMVYDSFFFGPNQLKAIHRLFPHHQHHQNSTFEVLTAFIWRCRTIALRLEPHKEVRFMATRNVRGIQSNPPLLPSGYYGNGFVFPAVVTTAGKLCRNSFGYALELVKKSKAMATVEYIQSAADLMVIKGRPSLTPLRAWAVSDVTRAGFEDVDFGWGKAIYGGPAMPGAGDFLGASFFVPHKNAKGEEGIVVPIFLPRKSMMIFMKELENNMIISKL 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1259g00001 449 Gene3D - 12 215 IPR023213 -
Pral1259g00001 449 Gene3D - 216 440 IPR023213 -
Pral1259g00001 449 Pfam Transferase family 16 441 - -
Pral1259g00001 449 PANTHER ACYL TRANSFERASE 4 11 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1259g00001 Pral-Chr1259 20248 21876 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1259g00001 20 440 Monolignol Biosynthesis Gene Families AT5G48930 30.365 1.91e-45 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1259g00001 K19861 - gmx:100799685 559.296