Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1253g00026 ATGGGTATGGCCGCAGAAACCCAGTTTCATGTTTTGGCTGTGGATGACAGTCTCATTGACAGAATGTTGATTGAGAGACTCCTCAAAACATCATCCTTCCAAGTTACTGCAGTGGATTCTGGAAGCAAGGCTTTGAAATTTCTTGGTTTGAATGAAGATGAGCAGAGAAAAGCAGATTCATTCTCTGTTTATTCTAATGGCCATCAGGATTTAGAAGTAAACCTGATCATAACAGATTACTGTATGCCAGGAATGACAGGCTATGACCTACTGAGAAAAATCAAGGATCTGAATCTCTCAAAAACATACCAGTGGTAA 318 0.3994 MGMAAETQFHVLAVDDSLIDRMLIERLLKTSSFQVTAVDSGSKALKFLGLNEDEQRKADSFSVYSNGHQDLEVNLIITDYCMPGMTGYDLLRKIKDLNLSKTYQW 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1253g00026 105 Gene3D - 4 103 - -
Pral1253g00026 105 SUPERFAMILY CheY-like 8 98 IPR011006 -
Pral1253g00026 105 ProSiteProfiles Response regulatory domain profile. 10 105 IPR001789 GO:0000160
Pral1253g00026 105 Pfam Response regulator receiver domain 11 98 IPR001789 GO:0000160
Pral1253g00026 105 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 95 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1253g00026 Pral-Chr1253 204612 206035 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1253g00026 1 96 Response Regulator Gene Family AT3G57040 70.103 1.53e-43 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pral1253g00026 Response_reg 4.3e-10 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1253g00026 K14492 - qsa:O6P43_001477 160.229