Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1253g00025 ATGGGTATGGCCGCAGAAACCCAGTTTCATGTTTTGGCTGTGGATGACAGTCTCATTGACAGAATGTTGATTGAGAGACTCCTCAAAACATCATCCTTCCAAGTTACTGCAGTGGATTCTGGAAGCAAGGCTTTGAAATTTCTTGGTTTGAATGAAGATGAGCAGAGAAAAGCAGATTCATTCTCTGTTTATTCTAATGGCCATCAGGATTTAGAAGTAAACCTGATCATAACAGATTACTGTATGCCAGGAATGACAGGCTATGACCTACTGAGAAAAATCAAGAAGATCATTAATTTTGCAGGATCTGAATCTCTCAAAAACATACCAGTGGTAATTATGTCCTCAGAGAATGTCCCATCAAGAATCAACAGATGCTTAGAAGAAGGAGCTCAAGAATTTTTTCTGAAACCTGTTCAACAGTCAGATGTAAACAAGCTCAAGCCACATTTGATGAAATCAAGAGTTAACGAAGAGGAAGACCAATTCATCAATAACAAAAGGAAGGACATGGAAAAAGAAACCCATTCACCCGATAAAACCAGAGCAAAAATATAG 558 0.3835 MGMAAETQFHVLAVDDSLIDRMLIERLLKTSSFQVTAVDSGSKALKFLGLNEDEQRKADSFSVYSNGHQDLEVNLIITDYCMPGMTGYDLLRKIKKIINFAGSESLKNIPVVIMSSENVPSRINRCLEEGAQEFFLKPVQQSDVNKLKPHLMKSRVNEEEDQFINNKRKDMEKETHSPDKTRAKI 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1253g00025 185 SMART REC_2 9 151 IPR001789 GO:0000160
Pral1253g00025 185 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 167 IPR045279 GO:0009736
Pral1253g00025 185 Gene3D - 10 183 - -
Pral1253g00025 185 Pfam Response regulator receiver domain 11 144 IPR001789 GO:0000160
Pral1253g00025 185 CDD REC_typeA_ARR 11 147 - -
Pral1253g00025 185 ProSiteProfiles Response regulatory domain profile. 10 152 IPR001789 GO:0000160
Pral1253g00025 185 MobiDBLite consensus disorder prediction 156 185 - -
Pral1253g00025 185 SUPERFAMILY CheY-like 8 152 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1253g00025 Pral-Chr1253 204612 206553 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1253g00025 1 156 Response Regulator Gene Family AT3G57040 67.516 4.30e-73 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pral1253g00025 Response_reg 4e-17 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1253g00025 K14492 - gmx:100787436 268.085