Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1253g00012 ATGGCTGATGTCAGTCCCAGGACAGATATTTCGACAGATGCTGATACTGACGAAAAGAATGGGCGGTTTGATAGAAGTCTGTCCAATGCTGCTGTTGCTTCTGATTCCAGTGACAGATCAAAGGACAAGTTGGATCAGAAGACTCTACGCAGGCTTGCTCAGAATCGAGAGGCTGCGAGAAAAAGCCGGTTGAGAAAGAAAGCTTATGTCCAGCAATTAGAAAGTAGTCGGTTGAAGTTGACCCAACTAGAGCAAGAACTCCAGCGAGCTAGACAGCAGGGAATCTTCATATCAAGCTCAGGCGACCAGGCACATTCAATGGGTGGAAATGGGGCGATGGCATTTGATGTAGAATATTCTAGGTGGCTAGAAGAGCAGAATCGACAAATTAATGAGCTAAGAGCAGCTGTAAACTCCCATGCAAGTGATACAGAACTTCGCATGATAATTGATGGTATATTGGCACATTATGATGAGATTTTTAAGCTGAAGAGCTCTGCTGCTAAGAATGATGTTTTCCATTTGTTGTCTGGCATGTGGAAAACACCTGCCGAGAGATGCTTTCTGTGGCTCGGTGGTTTTCGGTCATCCGAACTCCTCAAGCTTTTGGTAAATCAACTGGAACCTCTTACTGAGCAGCAGTTGGTCGGTATTACCAACTTGCAGCAATCGTCTCAACAGGCAGAAGATGCATTATCACAGGGTATGGAAGCATTGCAGCAGTCTCTAGCCGAGACACTGTCCAGTGGATCCCTTGGTTCATCTGGTTCATCAGGGAATGTGGCGAATTACATGGGCCAAATGGCTATGGCCATGGGTAAGCTAGGAACCCTTGAGGGATTCATTCGGCAGGCTGACAATCTGAGGCAGCAAACACTGCAACAAATGCACCGGATATTGACAACTCGTCAGTCGGCTCGCGCCTTGCTCGCCATACATGATTATTTCTCTCGGCTGCGTGCTCTCAGCTCCCTCTGGCTGGCTCGTCCCAGAGATTGA 999 0.4755 MADVSPRTDISTDADTDEKNGRFDRSLSNAAVASDSSDRSKDKLDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQAHSMGGNGAMAFDVEYSRWLEEQNRQINELRAAVNSHASDTELRMIIDGILAHYDEIFKLKSSAAKNDVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLVNQLEPLTEQQLVGITNLQQSSQQAEDALSQGMEALQQSLAETLSSGSLGSSGSSGNVANYMGQMAMAMGKLGTLEGFIRQADNLRQQTLQQMHRILTTRQSARALLAIHDYFSRLRALSSLWLARPRD 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1253g00012 332 MobiDBLite consensus disorder prediction 1 49 - -
Pral1253g00012 332 SMART brlzneu 43 106 IPR004827 GO:0003700|GO:0006355
Pral1253g00012 332 MobiDBLite consensus disorder prediction 10 24 - -
Pral1253g00012 332 PANTHER TRANSCRIPTION FACTOR TGA9 26 331 - -
Pral1253g00012 332 Pfam bZIP transcription factor 47 87 IPR004827 GO:0003700|GO:0006355
Pral1253g00012 332 Pfam Seed dormancy control 129 204 IPR025422 GO:0006351|GO:0043565
Pral1253g00012 332 Coils Coil 123 143 - -
Pral1253g00012 332 SUPERFAMILY Leucine zipper domain 47 90 IPR046347 GO:0003700|GO:0006355
Pral1253g00012 332 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 45 89 IPR004827 GO:0003700|GO:0006355
Pral1253g00012 332 Coils Coil 66 93 - -
Pral1253g00012 332 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 50 65 IPR004827 GO:0003700|GO:0006355
Pral1253g00012 332 ProSiteProfiles DOG1 domain profile. 112 329 IPR025422 GO:0006351|GO:0043565
Pral1253g00012 332 FunFam BZIP family transcription factor 46 95 - -
Pral1253g00012 332 Gene3D - 46 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1253g00012 Pral-Chr1253 44872 50636 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1253g00012 1 332 bZIP Transcription Factor Family AT3G12250 81.928 0.0 537
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral1253g00012 DOG1 4.4e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1253g00012 K14431 - pvy:116144120 563.918