Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1251g00002 ATGCCCGAAAGCGAATACTCCTCTAGGCTTCCATCATTACGGGGTACTATTCTCTCCATATTCTTCTGCATTGTTGCTTCACTTGCATTTTCTGCTGCTTCTGCTATTGAGGTTGGCGAAGCCAAAGCTCTGCTGAACTGGAAAGCGAGCCTTACCAAACAAAGCCAAGCGACATTGTCTTCATGGAACAGTAATGGCACTGATCTTTGCAGAAACTGGAAGGGAATTTCATGTGATGAAGAATCCGTGTCGGTGATCAGTATAAGACTGTCAAATCTTAGCCTTCAAGGTAAACTTCGCTATCTCAGCTTTGCTTCGTTTCCTAGTCTGCAATATTTTGACCTGAGTTACAACCACTTCTATGGCAACATTCCCCAAGAGATTGGTAACTTGTCCAGTATTTTGAAGTTTGATTTGTCAGAGAATCCTTCAATTACTGGTCCCATTCCTAAAGAAGTAGGAGCTTTGAGCACTCTCAGTGTTCTTGATCTTAGTGCATGTAAGCTCACGGATAGAATTCCTAGTGAAATTGGGAACTTGAGGAACCTAACGGATCTGGTGCTTGGTCAAAATTCTCTTTCTGGTTCCATTCCAGAAGAGATTGGAATGTTGAGTGATCTTTTACTACTTGATTTGGCCAAAAACTCCATGTTATCTGGCAGAATCCCATCATCAATTGGAAACTTGAACATGTTACAAGAACTTTATATTGATTTTTGCAATCTCTTTGGTCCTATACCAAATGAAATTGGAAAACTCAATTCTCTCACGACAATTTATTTAGAAAGCAATAAACTTTATGGGTCAATCCCTCCCTCTATGGGGAACTTGATAGGTCTTGAGGAGTTGGTCTTGTCGAATAACAATCTTTCTGGTTCAATTCCTCAATCCATTGGAAACTTGATCAATTTACAAGAAATCTATCTAGATTATAACAACCTTTCAGGATCTATTCCTTCCACTATAGGAAATTTGACAAAGCTCAACACTCTATTATTGATGGAGAACAATCTTAGTGGTCACCTTCCAGGAGAAATGAATAACATAACTTGGCACAATTTACAACTGGGTGATAATCATTTCCAAGGCCAATTACCACAACAGATTTGTCAGGATGGGAAGTTATATAGGTTTGTAGCTCAAAATAACCAGTTCATGGGTCCCATTCCAACTAGTTTGAAGAACTGTTCTAGTCTAGAAAGACTCAAGCTTCAAGGTAACCAACTAACTGACAATATAACATATGCTTTTGGAGTATATCCTTATTTGGACTTCATTGATCTAAGTGGAAATAAATTGTATGGTTACCTTTCATCCAAGTGGGGGAAGTGTCGAAATCTTAAACAATTGTTTATTCACAATAACAACCTTTCTGGTGAAATACCATCAGAGATGGGGGAGGCAGCTAAGCTTGTTGAACTTGACTTGTCTTCAAATCATTTGTCTGGACAAATCCCAAAAGAACTAGGCAAGTTGATAATGTTGACAAAACTCTTTTTGAGCCACAATAACTTCTCTGGTAACGTCCCCTCAAATATAAGATCACTTAGTCAACTTGAAACATTGGAGTTGGCCACAAATAATTTCTATGGCTTAATCACAAGAGAGCTTGGGGAACTAAAAAACTTAAAGTTCTTGAACTTGAGCAGAAACAAATTTGATGAAAGCATTCCCCTTGAGTTCGGTCAACTCCAGGAGCTTGAACAACTTGATCTTAGTGACAATTTGCTCAATGGAACAATACCATCAGTGCTTGGAATGTTACCCAAATTGCAAGTATTGAACCTCTCACATAATGATCTCACTAGCACCATTCCTTCTAGTTTTAGCAGATCAATGTCAGCTTTGACTACTGTTGACTTATCAAACAATCAATTAGAAGGCCCCGTTCCAAACAAACCAGTCTTTCAAATATTTGAAGGATTGAAGAATAATAAAGGTTTGTGCGGTAACGTCACTGGTTTACATCCTTGCAGTAATTCTCAAATGCGTGCCACAATGCACTTTGATGATAGATATCTCATTGGGAAAGGTGGCCAAGGAAGTGTTTACAAGGCAGAGTTACCAACAGGTGATATTTTTGCTGTAAAAAAGCTTCATTCCTTACCCAGTGGAGAAATCTTCAGCGAGAAAGCTTTCACAAGTGAGATTCGTGCTTTGATAGAAATCAAACATCGTAACATTGTGAAGTTGTATGGTTTTTGTTCCAATCCACGATTCTCTTTTTTGGTCTATGAGTTCTTGGAAGGTGGCAGCTTGGACAACATACTAAAGAATGAGAACCAAGCCACTAAGCTTGATTGGAAAAAGAGAGTGAATGTTGTTAGAGGTGTCGCCAGTGCTTTATTCCATATGCATCATGGCTGTTCAATTCCTATTGTTCATCGTGACATATCAAGCAAGAATGTTCTTCTAACTATAGAATATGAAGAAGCTCGGCTCATTGACTTTGGAGGAGCGAAGTTTCTCAATCCTGACTCAAAAAATGTGACCACATTCGTTGGTACCTTCGGGTATGCTGCTCCAGAGATTGCATATATTATGGAAGCAAACGAGAAATGTGATGTTTACAGCTTTGCAGTGTTGACTTTAGAGATAATTATGGGAATACATCCAGGAGAGCTTATTTCATCTTTGATGGAAAAATCAACCGCGTATGATTTGCTATTAAAGGATATGTTGGACCCACGACTTTCACCGCCTAGGAAATCAATCCTTGACGAGGTTATTGCAGTTGCAAAAATAGCATTTTCTTGTTTGAATGAGAATCCTCAGTCTCGTCCAACCATGGAACAAGTATCTATGAAGCTTGATCGGCGACCAAAGCCTCACATGGAAGAACCATTTGTCACGGTCACAATTAGACAACTAATGAATGATTAA 2883 0.3885 MPESEYSSRLPSLRGTILSIFFCIVASLAFSAASAIEVGEAKALLNWKASLTKQSQATLSSWNSNGTDLCRNWKGISCDEESVSVISIRLSNLSLQGKLRYLSFASFPSLQYFDLSYNHFYGNIPQEIGNLSSILKFDLSENPSITGPIPKEVGALSTLSVLDLSACKLTDRIPSEIGNLRNLTDLVLGQNSLSGSIPEEIGMLSDLLLLDLAKNSMLSGRIPSSIGNLNMLQELYIDFCNLFGPIPNEIGKLNSLTTIYLESNKLYGSIPPSMGNLIGLEELVLSNNNLSGSIPQSIGNLINLQEIYLDYNNLSGSIPSTIGNLTKLNTLLLMENNLSGHLPGEMNNITWHNLQLGDNHFQGQLPQQICQDGKLYRFVAQNNQFMGPIPTSLKNCSSLERLKLQGNQLTDNITYAFGVYPYLDFIDLSGNKLYGYLSSKWGKCRNLKQLFIHNNNLSGEIPSEMGEAAKLVELDLSSNHLSGQIPKELGKLIMLTKLFLSHNNFSGNVPSNIRSLSQLETLELATNNFYGLITRELGELKNLKFLNLSRNKFDESIPLEFGQLQELEQLDLSDNLLNGTIPSVLGMLPKLQVLNLSHNDLTSTIPSSFSRSMSALTTVDLSNNQLEGPVPNKPVFQIFEGLKNNKGLCGNVTGLHPCSNSQMRATMHFDDRYLIGKGGQGSVYKAELPTGDIFAVKKLHSLPSGEIFSEKAFTSEIRALIEIKHRNIVKLYGFCSNPRFSFLVYEFLEGGSLDNILKNENQATKLDWKKRVNVVRGVASALFHMHHGCSIPIVHRDISSKNVLLTIEYEEARLIDFGGAKFLNPDSKNVTTFVGTFGYAAPEIAYIMEANEKCDVYSFAVLTLEIIMGIHPGELISSLMEKSTAYDLLLKDMLDPRLSPPRKSILDEVIAVAKIAFSCLNENPQSRPTMEQVSMKLDRRPKPHMEEPFVTVTIRQLMND 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1251g00002 960 Gene3D Ribonuclease Inhibitor 351 660 IPR032675 -
Pral1251g00002 960 Gene3D Transferase(Phosphotransferase) domain 1 748 949 - -
Pral1251g00002 960 SUPERFAMILY Protein kinase-like (PK-like) 660 935 IPR011009 -
Pral1251g00002 960 SMART LRR_typ_2 540 563 IPR003591 -
Pral1251g00002 960 SMART LRR_typ_2 492 516 IPR003591 -
Pral1251g00002 960 SMART LRR_typ_2 180 204 IPR003591 -
Pral1251g00002 960 SMART LRR_typ_2 301 325 IPR003591 -
Pral1251g00002 960 SMART LRR_typ_2 107 131 IPR003591 -
Pral1251g00002 960 SMART LRR_typ_2 277 300 IPR003591 -
Pral1251g00002 960 SMART LRR_typ_2 564 587 IPR003591 -
Pral1251g00002 960 SMART LRR_typ_2 588 612 IPR003591 -
Pral1251g00002 960 SMART LRR_typ_2 253 276 IPR003591 -
Pral1251g00002 960 ProSitePatterns Tyrosine protein kinases specific active-site signature. 793 805 IPR008266 GO:0004672|GO:0006468
Pral1251g00002 960 Gene3D Phosphorylase Kinase; domain 1 661 747 - -
Pral1251g00002 960 FunFam MDIS1-interacting receptor like kinase 2 748 942 - -
Pral1251g00002 960 FunFam Leucine-rich repeat receptor protein kinase MSP1 657 747 - -
Pral1251g00002 960 ProSiteProfiles Protein kinase domain profile. 669 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1251g00002 960 Pfam Leucine rich repeat N-terminal domain 40 79 IPR013210 -
Pral1251g00002 960 ProSiteProfiles Leucine-rich repeat profile. 590 611 IPR001611 GO:0005515
Pral1251g00002 960 PRINTS Leucine-rich repeat signature 588 601 - -
Pral1251g00002 960 PRINTS Leucine-rich repeat signature 471 484 - -
Pral1251g00002 960 Gene3D Ribonuclease Inhibitor 279 350 IPR032675 -
Pral1251g00002 960 Pfam Leucine rich repeat 561 601 IPR001611 GO:0005515
Pral1251g00002 960 Pfam Leucine rich repeat 255 314 IPR001611 GO:0005515
Pral1251g00002 960 PANTHER LEUCINE RICH REPEAT KINASE 2 663 940 - -
Pral1251g00002 960 FunFam Nuclear pore complex protein NUP107 37 186 - -
Pral1251g00002 960 SUPERFAMILY L domain-like 56 344 - -
Pral1251g00002 960 SUPERFAMILY RNI-like 316 630 - -
Pral1251g00002 960 Gene3D Ribonuclease Inhibitor 38 199 IPR032675 -
Pral1251g00002 960 Gene3D Ribonuclease Inhibitor 200 278 IPR032675 -
Pral1251g00002 960 FunFam Leucine-rich receptor-like protein kinase family protein 246 344 - -
Pral1251g00002 960 Pfam Protein kinase domain 673 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1251g00002 960 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 349 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1251g00002 Pral-Chr1251 28100 31265 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1251g00002 663 842 Receptor kinase-like Gene Family AT4G08850 56.284 8.93e-56 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral1251g00002 Pkinase 4.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1251g00002 - - pcin:129295243 938.717