Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1245g00015 ATGGTACTCGTCATCAACTGGGAAAGATTGGCAATGGAATTCGTCTTTTGGTGTATTGCACAAATGATATTACTAGCTGGACCAGGTGTTTTGCTCTCAACCTTCTGTCTTGGATCTGTTTTGAAGCTTACTTTTCCATATAACTGGAGTTGGAAAACATCACTATTGCTTGGAGGACTTCTGAGTGCAACTGATCCTGTAGCAGTTGTGGCTTTGCTGAAGGAGCTTGGTGCCTGCAAGAAACTGACTACAATAATTGAAGGGGAGTCCATGATGAATGATGGAGTGGCAATGGTTGTTTATACACTATTTTATCGGATGGTCCTTGGAGAGAGCTTCAACTGGGTGGCCATAATCAAATTTCTATCTGAAGCCTCTCTTGGAGCTGTAGGAATTGGTCTTGCTTTTGGGGTAGCATCAGTTCTGTGGCTTGGATATATTTTCAATGATACAGTGATGGAGATTACTTTAACACTTGCTGTTAGCTATGTTGCTTACTTTACTGCTCAAGAGGGTGCTGATGTTTCTGGCATTCTGACAGTGATGACTCTGGGAATGTTTTACTCTGCAGTTGCAAGGATAGCTTTCAAAAGTGATGGACCAGAAAGCTTGCGTCACTTTTGGGAAATGGTTGCTTATATTTTCAATACATTAATTTTCATATTGAGTGGAGTTATTATTGCTGAAGGCATCCTTAATGGTTCCAGTGTCACTGCTGATGGAAAATCATGGGCCAACCTCTTTCTTCTCTATGCCTATGTTCAAGCATCTAGATGCATAGTAGTTGGAGCACTTTATCCCTTCCTGAGTTATTTTGGACATGGTTTGGATTGGAAAGAGGCTGTGTTTCTCGTTTGGTCAGGATTGCGAGGGCCAGTTTCCTTGTCACTATCATTGTCAGTTAAGCGTTCCACTGGCAAATCAATTGAATGGAATTCAGATACAGGAACACTGTTTGTTTTCTTCACCGGTGGAATCGTGTTTTTGACAGTTATAGTAAATGCTTCGACTACACAGCTCATTTTACACCTCCTAGATATGGACAAGTTCTCTTCAGCTAAGAAACGGATCCATGAGTACTCAAAGCCTGAATTGTCGCGCAAAGCATTAGAGGCTTTTGGCAAGCTTGGCGATGATGAGCAACTGGGACCTGCTGATTGGCCGACAGTGAAGAGATATTTAACATGCTTAAATAGCATTGAAGGTCAATGTATTCACTATCATGGTGAACCTGAAAGTGACAGTACTCTGGATCCTATGAAATTGGAAGATTTAAGAATATGCTTTTTGAATGGTGTTCAAACTGCTTACTGGGAGATGCTTGATGAGAGAAGAATTTCACAAACAACGGCTGACATCTTAGTGAGATCGGTGGAGGAAGCTAGAGATTTGGCTTCATTTGGGCCTTTACGTGATTGGAAAGGTTTAAGAGATAGAGTTCGCTTCCCAAGTTATTACAATTTCCTTCAGACTGGAGTTTTACCACAGAAATTAGTTACATATTTTGTTGTGGAAAGATTGGAATCTGCATGTTGTATTTGTGCTGCATTCCTTCATGCCCATAAAATTGCTCGACAACAGTTGCATGACTTCACAGGCGACAGTGATATTTCATCCATCATCATCAATGAAAGCGTTGTAGAAGGAGAAGAAGCAAGGAAGTTCCTTGATGATGTTCATATGAAATTCCCTCAGGTTCTTCGTGTTGTGAAAACAAGGCAAGCTGCATATTTAGTGTTAAACCATTTAATTGAATATGTTCAAAACCTTGAAAAGTCTGGGTTACTGCGGGAGAGAATGAAGCTGCATCTTCATGAGGCTGTCCAGACTGATTTGAAGAAATTAGTTAGGACTCCTTTATCGTTGAAGTTTCCTGAAAAGAATAGTATACATCCTATGTTGGGTTCCCTGCTATCTTCTGTCCATGAACCACTTTCAAGCAATAGCAGGGGAATGATGAAATTGCGTGGTCTGACACTTTACAAAGAGGGATCCAAACCAGACGGTATTTGGTTAATTTCTAGTGGGGTTGTGAAGTGGGAAAGCAATAGAATAAGAAACAAGCACTCCTTTTGTCCAACTTTTACTCATGGCAGTACATTGGGTCTGTATGAAGTACTCACTGGAAGACCATATATCTGTGATGTTATAACAGATTCAGTAGTGCTCTGTCTTTTCCTTGAAGATGACAAGATATTATCCTGTCTCAAATCAGATCCCTCTGTTGAAGACTTCCTGTGGCAGGAGAGTGCTATTTTCCTTTGCAAGATCTTGCTTCCTCAGATATTTGAAAAAATGGCAATGCAAAATTTAAGAGCCCTTGTTGTGGAAAGATCTGTAATGACCGTATACATTAGGGGAGAATCGATAGAAATACCTCACCATTCAGTTGGAATTTTACTTGAAGGATACGTTAAAATGGAAGGTCTTCAAGAACTGATAACATCACCAGCTGCTCTTTTGCCTTCTCCTGGGAATCTAATTTTCCAGAATCTGGAAGCTTCTGGTATAGAAAACGGAAGTTTTTCTCATCAAGCTTCATCTTATCTAGTTGAAAAAAGAGCAAGGGTAATCGTGTTTGACGTTGCAGCATTTGAGGCTGATGCTGTTCTTTCTAGAAGGTCAAGTTCACTGTTAACTCATGCAGTTGATTATCCCCATGGATTAAGCAAGGAAAATAGTGGTTTGTTAAGTCTGCTTGGAAATTTCATCAAGCCAAGGCAACATAAGCGATATTGCCAAGGTGTTGGACAACAGACCAATAGTTTGTCTGCAAGGGCAATGCAGTTTAGCATTTATGGTTGCACGGTGGACATCTGTCAGCGGAGAAGTTTGTCCGGCAATCCTTCAGGAACCCCTCATATGAAGATGGACCTTGAAGTGAGCCAGTGCACAGGGAATGTTGCAAATGCCTCTGTCCAAAGCAGAGAACAAAGGGGAAGTTATACGGATTACACAGTTGCTGAATCTGCTGGTGAAGAAGATACCATACCATTACTGATAAAACGCGAAGACCTAAACTGA 3024 0.4087 MVLVINWERLAMEFVFWCIAQMILLAGPGVLLSTFCLGSVLKLTFPYNWSWKTSLLLGGLLSATDPVAVVALLKELGACKKLTTIIEGESMMNDGVAMVVYTLFYRMVLGESFNWVAIIKFLSEASLGAVGIGLAFGVASVLWLGYIFNDTVMEITLTLAVSYVAYFTAQEGADVSGILTVMTLGMFYSAVARIAFKSDGPESLRHFWEMVAYIFNTLIFILSGVIIAEGILNGSSVTADGKSWANLFLLYAYVQASRCIVVGALYPFLSYFGHGLDWKEAVFLVWSGLRGPVSLSLSLSVKRSTGKSIEWNSDTGTLFVFFTGGIVFLTVIVNASTTQLILHLLDMDKFSSAKKRIHEYSKPELSRKALEAFGKLGDDEQLGPADWPTVKRYLTCLNSIEGQCIHYHGEPESDSTLDPMKLEDLRICFLNGVQTAYWEMLDERRISQTTADILVRSVEEARDLASFGPLRDWKGLRDRVRFPSYYNFLQTGVLPQKLVTYFVVERLESACCICAAFLHAHKIARQQLHDFTGDSDISSIIINESVVEGEEARKFLDDVHMKFPQVLRVVKTRQAAYLVLNHLIEYVQNLEKSGLLRERMKLHLHEAVQTDLKKLVRTPLSLKFPEKNSIHPMLGSLLSSVHEPLSSNSRGMMKLRGLTLYKEGSKPDGIWLISSGVVKWESNRIRNKHSFCPTFTHGSTLGLYEVLTGRPYICDVITDSVVLCLFLEDDKILSCLKSDPSVEDFLWQESAIFLCKILLPQIFEKMAMQNLRALVVERSVMTVYIRGESIEIPHHSVGILLEGYVKMEGLQELITSPAALLPSPGNLIFQNLEASGIENGSFSHQASSYLVEKRARVIVFDVAAFEADAVLSRRSSSLLTHAVDYPHGLSKENSGLLSLLGNFIKPRQHKRYCQGVGQQTNSLSARAMQFSIYGCTVDICQRRSLSGNPSGTPHMKMDLEVSQCTGNVANASVQSREQRGSYTDYTVAESAGEEDTIPLLIKREDLN 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1245g00015 1007 Pfam Sodium/hydrogen exchanger family 15 342 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Pral1245g00015 1007 Gene3D - 50 102 - -
Pral1245g00015 1007 SUPERFAMILY cAMP-binding domain-like 645 747 IPR018490 -
Pral1245g00015 1007 Pfam Cyclic nucleotide-binding domain 657 738 IPR000595 -
Pral1245g00015 1007 ProSiteProfiles cAMP/cGMP binding motif profile. 657 728 IPR000595 -
Pral1245g00015 1007 Gene3D Jelly Rolls 643 755 IPR014710 -
Pral1245g00015 1007 PANTHER SODIUM/HYDROGEN EXCHANGER 15 693 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1245g00015 Pral-Chr1245 63359 78023 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1245g00015 18 946 Antiporters AT2G01980 61.448 0.0 1113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1245g00015 K14726 - gmx:100789429 1307.74