Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1245g00006 ATGCACTTCACCATGTCTCTCCCAAAACCACCTTCTGAAATCTCCTTTCGCTCCGCTTTTGCTCCTCGCTTTGCCAACCACTCTCTTCCCAGGTTGAGTATGCCGGAGAAGGCGATGCCGAAGGAGGCGGCGTACCGGAACATTCACGACGAGCTGAAGCTGGACGCGGATCCCAAGCTGAACTTGGCATCCTTCGTGAACACTTCCATGGAGGAAGAATGCAACAAGCTCGTCATGGAATCCATTAACAAGAACTACGTTAACATGGACGAGTACCCAATGACCACCGACCTTCACAATCGATGCGTGAACATGCTGGCAAGATTGTTCAATGCTCCGATGGAAGAAAGTGAAAGTGAGAGCGGCGTGGGAGTGGGAACGGTTGGATCCTCGGAAGCCATAATGCTGGCGGGGCTGGCCTTCAAGAAGAGATGGCAGAACATGAGGAAGGCTCAAGGCAAGCCTTTCGACAGGCCTAACATTGTCACAGGCTCTAACGTTCAGGTGTGTTGGAAGAAATTTGCGATGTACTTCGAGGTGGAATTGAAGGAAGTGAAGATGTCGGAAGGGTGCTACGTGATGGACCCAGCAAGAGCGGTGGAGATGGTGGACGAAAACACAATCTGTGTTGCAGCAATACTGGGTTCTACTTACAATGGCGAATTCGAAGACGTCAAGCTCTTGAACGACCTCCTCCTCCGAAAGAACAAACAAACTGGATGGGAGACGTCGATTCATGTGGACGCGGCAAGTGGAGGTTTTATTGCTCCATTTTTGTACCCAGAGCTAGAGTGGGATTTCAGGCTGCCATTGGTGAAGAGTATAAATGTGAGTGGGCACAAGTACGGACTGGTTTATGCAGGCATTGGCTGGGTGCTTTGGAGGACCAAAGAAGACTTGCCTCAAGAGCTCATCTTCCACATCAATTACCTCGGAGCTGATCAGCCCACCTTCACCCTCAATTTCTCCAAAGGTTCTAGCCAGATTATCGCCCAGTATTATCAGCTGATTCGCTTGGGCAAAGAGGGCTACCGTAATGTGATGGAGAACTGTAGAGAAAATGCGATGGTTGTAAAGGAAGGGATAGTGAACACTGGATGCTTCAACATAGTTTCCAAGGACGAGGGCGTTCCCGTGGTGGCGTTCTCGCTCAAGGACAGAAGCCGGCACGACGAGTTCAAGATCTCGGCCATGCTCCGCCGGCACGGGTGGGTCGTGCCGGCGTATCCGATGCCGCCGGGCGCTGAACACATTATAGTGCTGCGTGTAGTGATAAGGGCCGATTTCTGTCGCCAAATGGCCGAACGCCTTGTGATGGACATAACAAATGCGTTGCACGAACTTGAAATGCTTCCTCAATACAACTCCAATAAGAGTGATCAAGCTATTAATACTTCTGGCAGCATTAATATGAAGGATGATCAGAATAATAGGAATGTCGAAGGAGTGAAGTGGATTGCGTTGGATGTTCAAAGACATATCATTGCTCAAGAAGCAATAAACAAGCGCCAAAAAATCTTGGCTGCCTAA 1530 0.4974 MHFTMSLPKPPSEISFRSAFAPRFANHSLPRLSMPEKAMPKEAAYRNIHDELKLDADPKLNLASFVNTSMEEECNKLVMESINKNYVNMDEYPMTTDLHNRCVNMLARLFNAPMEESESESGVGVGTVGSSEAIMLAGLAFKKRWQNMRKAQGKPFDRPNIVTGSNVQVCWKKFAMYFEVELKEVKMSEGCYVMDPARAVEMVDENTICVAAILGSTYNGEFEDVKLLNDLLLRKNKQTGWETSIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVLWRTKEDLPQELIFHINYLGADQPTFTLNFSKGSSQIIAQYYQLIRLGKEGYRNVMENCRENAMVVKEGIVNTGCFNIVSKDEGVPVVAFSLKDRSRHDEFKISAMLRRHGWVVPAYPMPPGAEHIIVLRVVIRADFCRQMAERLVMDITNALHELEMLPQYNSNKSDQAINTSGSINMKDDQNNRNVEGVKWIALDVQRHIIAQEAINKRQKILAA 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1245g00006 509 NCBIfam glutamate decarboxylase 19 449 IPR010107 GO:0004351|GO:0006536|GO:0030170
Pral1245g00006 509 SUPERFAMILY PLP-dependent transferases 20 448 IPR015424 -
Pral1245g00006 509 Gene3D - 365 452 - -
Pral1245g00006 509 PANTHER GLUTAMATE DECARBOXYLASE 16 481 IPR010107 GO:0004351|GO:0006536|GO:0030170
Pral1245g00006 509 FunFam Glutamate decarboxylase 365 452 - -
Pral1245g00006 509 FunFam Glutamate decarboxylase 7 67 - -
Pral1245g00006 509 Pfam Pyridoxal-dependent decarboxylase conserved domain 35 385 IPR002129 GO:0016830|GO:0019752|GO:0030170
Pral1245g00006 509 FunFam Glutamate decarboxylase 68 364 - -
Pral1245g00006 509 Gene3D - 8 67 - -
Pral1245g00006 509 CDD DOPA_deC_like 61 444 - -
Pral1245g00006 509 Gene3D - 68 363 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1245g00006 Pral-Chr1245 20877 23276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1245g00006 12 496 Calmodulin-binding Proteins AT5G17330 72.840 0.0 733
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1245g00006 K01580 - gmx:100812201 745.732