Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1244g00003 ATGGCTTCGGCTGCAACAGTAGAGTTTCTTCCTGGCTTCCATGGATCCCTTCCTTTCCAGCTTGAAACTGGGTATGTGGGAGTTGGGGAAGGAGAAGAAGTGCAAGTTTTCTATTATTTTATTAAGTCAGAGAACAATCCTGAAGAAGATCCTCTCCTTCTTTGGCAATCTGGGGGTCCTGGTTGCTCTAGCTTCGTTGGACTTGTAAATGAAATAGGTCCGCTTGCATTTATAAACCAACAATACAATGGGAGCTTGCCTAGCTTAGTCTTGAGGTCTCAATCATGGACTAAGGTAAGTAGTATTATCTTTGTAGATTTACCTATTGGATCAGGCTTCACTTACACCAAAGCAAAAGGAGTTGTTGGGCAGAGTGATTGGATCCTAATTCATCATGCCCACCAATTCTTGAGGAAGTGGCTGATCAATCATCCGGAATACCTGTCACATAAAGTTTATCCAGCTGGTGACTCCTATGCTGGCATTCTTATCCCAGCCTTGTTTCAAGAAATTTCACACGCCAATGAAAATGGGGTTCAGCCACAGATAAATATCCAGGGATACATACTGGGGAATCCAGTGACAACTAAACTTGAAATAAATTATGCAATCCCTTTTGCTCACGGAATGGGACTCATCTCGGATGAACTCTACGAGTCATTACAGCAGAACTGTAGAGGAAATTACCAAAACATAGATCCCAGAAACTTGTTATGTGTCAGAGATTTCCAGTCATTCCAAGAGTTAACTGCAGAAGTGGATCATGCTCAGATTTTGGAACCAGCCTTTTGCGGTTATGATTTAAACTCGATGCCTCAAGGAAGAACTATTTTGAAGAGATCTCTAACTCAGAAAGTGAAGGCCAGTGACTATACCGCATCAAGATGTCGGAGATACGAGTATCTTGAAGCCCAATATTGGGCCAATAATGATGACGTTCGCAAAGCACTCCATGTTCGAAAGGGGACTGTAGGACATTGGGAGCGTTGTCGTAATATTACAACGTATAAGTCTGATATCAATAGCAGCTTTCATTTTCACGTAAATCTCAGTGCAAAAGGCTATCGTTCTTTAATATACAGTGGGGATCATGACATGATAGTTTCTTTCTTATCAACACAAGCATGGATCAGATCTTTGAATTATTCCAATGTTCATGACTGGAGGCCTTGGCATGTCAATGGCCAGGTTGCTGGGTACACGAGGACGTACTCCAATCGAATGACATTTGCAACTGTCAAGGGTGCCGGACATACAGTTCCAGAGTTCAAACCTGAAGAAAGTCTTGCCATGTTCAAGAGATGGATAGCTAACGAGAATCTCTAG 1326 0.4231 MASAATVEFLPGFHGSLPFQLETGYVGVGEGEEVQVFYYFIKSENNPEEDPLLLWQSGGPGCSSFVGLVNEIGPLAFINQQYNGSLPSLVLRSQSWTKVSSIIFVDLPIGSGFTYTKAKGVVGQSDWILIHHAHQFLRKWLINHPEYLSHKVYPAGDSYAGILIPALFQEISHANENGVQPQINIQGYILGNPVTTKLEINYAIPFAHGMGLISDELYESLQQNCRGNYQNIDPRNLLCVRDFQSFQELTAEVDHAQILEPAFCGYDLNSMPQGRTILKRSLTQKVKASDYTASRCRRYEYLEAQYWANNDDVRKALHVRKGTVGHWERCRNITTYKSDINSSFHFHVNLSAKGYRSLIYSGDHDMIVSFLSTQAWIRSLNYSNVHDWRPWHVNGQVAGYTRTYSNRMTFATVKGAGHTVPEFKPEESLAMFKRWIANENL 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1244g00003 441 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 7 425 IPR001563 GO:0004185|GO:0006508
Pral1244g00003 441 FunFam Serine carboxypeptidase-like 11 1 441 - -
Pral1244g00003 441 Pfam Serine carboxypeptidase 11 438 IPR001563 GO:0004185|GO:0006508
Pral1244g00003 441 Gene3D - 295 441 - -
Pral1244g00003 441 FunFam Carboxypeptidase 295 440 - -
Pral1244g00003 441 Gene3D alpha/beta hydrolase 2 269 IPR029058 -
Pral1244g00003 441 FunFam Carboxypeptidase 344 438 - -
Pral1244g00003 441 SUPERFAMILY alpha/beta-Hydrolases 7 439 IPR029058 -
Pral1244g00003 441 PRINTS Carboxypeptidase C serine protease (S10) family signature 92 104 IPR001563 GO:0004185|GO:0006508
Pral1244g00003 441 PRINTS Carboxypeptidase C serine protease (S10) family signature 105 115 IPR001563 GO:0004185|GO:0006508
Pral1244g00003 441 PRINTS Carboxypeptidase C serine protease (S10) family signature 408 421 IPR001563 GO:0004185|GO:0006508
Pral1244g00003 441 PRINTS Carboxypeptidase C serine protease (S10) family signature 140 165 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1244g00003 Pral-Chr1244 25173 30302 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1244g00003 304 441 Calmodulin-binding Proteins AT2G22960 60.145 2.14e-56 182