Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1244g00001 ATGACTTCTTTTTTGAAGCCTGAGAATGCTCTGAAAAGAGCGGAAGAATTGATTAATGTTGGACAGAAGCAGGATGCTTTGCAAACTCTACATAGCCTTATCACTTCAAAAAGATATAGAGCATGGCAGAAGACACTTGAAAGGATAATGTTTAAATATGTAGAACTGTGCGTAGACATGCGGAAAGGGCGATTTGCGAAGGATGGGCTCATTCAGTATCGTATTATATGTCAGCAAGTTAATGTCAGTTCACTGGAGGAGGTGATCAAGCATTTCATGCATCTGTCAACGGAGAAGGCTGAACAAGCTCGCAGCCAGGCACAGGCATTGGAAGAGGCTCTCGATGTTGATGATTTAGAGGCAGATAAAAGGCCTGAGGACTTGATGCTTAGTTATGTGAGTGGAGAGAAAGGAAAAGAGAGATCTGACAGGGAGCTTGTTACTCCATGGTTTAAATTTCTCTGGGAAACGTATAGGACAGTGCTTGAAATATTACGCAACAATTCAAAACTGGAAGCTCTATATGCTATGACAGCACATCGGGCTTTTCAATTTTGTAAGCAATATAAGCGAACAACAGAGTTCCGCAGACTTTGTGAAATTATAAGAAACCATCTTGCCAATCTTAATAAATATCGAGACCAACGTGACCGACCTGATCTTTCAGCACCTGAAAGCCTGCAACTATATCTAGATACCAGATTTGAGCAGCTGAAAGTTGCAACTGAGCTTGAACTCTGGCAGGAAGCTTTTAGATCTATTGAAGATATACATGGACTTATGTGCATTGTCAAGAAAACACCCAAGGCATCATTGATGGTTCTCTACTATGCTAAGCTGACAGAAATATTTTGGATATCGTCAAGCCATCTATATCATGCATATGCGTGGTTCAGGCTCTTTTTACTGCAGAAGAACTTTAATAAGAATCTGAGCCAGAAAGATCTTCAATTGATAGCTTCGTCTGTTGTTCTGGCTGCACTTTCAGTGCCTCCCCATGATCACACTCAAGGTGCATCTCATTTGGAATTGGAGCATGAAAAAGAGAGGAATTTGAGGATGGCTAATCTCATTGGTTTTAACCTTGAAAGTAAACCTGAGAGCAGAGAAGTGCTTTCAAGGTCAGCCCTTCTTGCTGAACTGGTGTCCAAGGGTGTAATGTCTTGTGTGACTCAGGAAGTGAAGGACATTTATCATCTCTTGGAACATGAATTTCTTCCCCTGGATCTTCCATCGAAAGTTCAGCCTCTGCTAACTAAAATATCTAAGTTGGGGGGTAAGCTCTCCACTGCTTCTTCTGTCCCTGAGGTGCAGCTGTGTCAGTATGTCCCAGCATTGGAGAAACTAGCTACCTTGAGGTTGCTACAGCAGGTGTCCAACGTTTACCAGACAATGAAGATTGAGACCTTATCTGGAATGATCCCCTTTTTTGATTTTTCTGTTGTGGAGAAGATTTCTGTGGATGCTGCTAAGCATAAGTTTGTATCCATGAAAGTTGATCACATGAGGAAGGTTGTAGTTTTCTGCAAGACGAATCTAGAGTCTGATGGCTTAAGGGATCACTTGGCTAAGTTTGCTGAACATCTGAACAAGGCGAGACAAATGATTTATCCTCCTGATAGAAAACCATCAAAAATTGGAGCTTTGCTTCCCTCCTTGAATGAAGTTGTTGCCAAGGAACACAAGAGGCTTCTTGCACGGAAATCAATTATTGAGAAGCGAAAAGAAGAACAAGAACGGCAGCTTCTTGAAATGGAAAGAGAGGAGGAATCAAAGAGATTGAGACTGCAGAAAATAACTGAAGAAGCAGAACAAAGAAGACTTGCCAATGAGTATGAGCAGAGGAAGAATCAGAGAATTCTCAGAGAAATAGAAGAGAGAGAAATGGAAGAAGCTCAAGCATTGCTTCAGGAAGCTGAGAAGCGTATTAAAAAGAAGGGAAAGAAGCCAATCATTGAGGGTGAAAAACTGACCAAGCAAACACTGATGGAGTTGACGTTGACTGAACAACTCCGGGAAAGACAAGAAATGGAAAAGAAACTACAAAAATTAGCTAAAACAATGGACTATTTGAAAGAGCAAAAGAAAAGAGAGGAGGCTGCTCCCTTGATTGAAGCTGCATATCAAAAGCGCCTAGTGGAAGAAAAGCTTCTCCATGAGCGTGAGCAACAGCTTGAGGTTGAAGTTAGCAAACAGCGCCATGAGGGAGATCTCAAGGAGAAGGAAAGGCTGGCTCGTATGGTTGGCAATAAAGAGATTTATCAAGAGAGAGTCGTCAGTTCTCGTCAGGCAGAATTTAATAGGTTGAGTCGGGAAAGAGAGGAGCGAATCTCAAGGATTTTACAGGCCAGGAGACAGGAGAGGGAAAAGATGAGGAAGTTGAAGTATTATCTGAGGTTAGAAGAAGAGAGACAGGAAAAATTGCGTGAAGAGGAGGAAGCTCGGAAGCGTGAAGAGGCTGAGAGGCGGAAGAAGAAGAGGCTGAGCACTTGGCGAAATTGGCTGAGATACTAG 2514 0.4228 MTSFLKPENALKRAEELINVGQKQDALQTLHSLITSKRYRAWQKTLERIMFKYVELCVDMRKGRFAKDGLIQYRIICQQVNVSSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKERSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKVATELELWQEAFRSIEDIHGLMCIVKKTPKASLMVLYYAKLTEIFWISSSHLYHAYAWFRLFLLQKNFNKNLSQKDLQLIASSVVLAALSVPPHDHTQGASHLELEHEKERNLRMANLIGFNLESKPESREVLSRSALLAELVSKGVMSCVTQEVKDIYHLLEHEFLPLDLPSKVQPLLTKISKLGGKLSTASSVPEVQLCQYVPALEKLATLRLLQQVSNVYQTMKIETLSGMIPFFDFSVVEKISVDAAKHKFVSMKVDHMRKVVVFCKTNLESDGLRDHLAKFAEHLNKARQMIYPPDRKPSKIGALLPSLNEVVAKEHKRLLARKSIIEKRKEEQERQLLEMEREEESKRLRLQKITEEAEQRRLANEYEQRKNQRILREIEEREMEEAQALLQEAEKRIKKKGKKPIIEGEKLTKQTLMELTLTEQLRERQEMEKKLQKLAKTMDYLKEQKKREEAAPLIEAAYQKRLVEEKLLHEREQQLEVEVSKQRHEGDLKEKERLARMVGNKEIYQERVVSSRQAEFNRLSREREERISRILQARRQEREKMRKLKYYLRLEEERQEKLREEEEARKREEAERRKKKRLSTWRNWLRY 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1244g00001 837 Coils Coil 667 701 - -
Pral1244g00001 837 MobiDBLite consensus disorder prediction 805 826 - -
Pral1244g00001 837 Coils Coil 615 649 - -
Pral1244g00001 837 ProSiteProfiles PCI domain profile. 316 513 IPR000717 -
Pral1244g00001 837 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 827 IPR027512 GO:0005852
Pral1244g00001 837 FunFam Eukaryotic translation initiation factor 3 subunit A 217 268 - -
Pral1244g00001 837 FunFam Eukaryotic translation initiation factor 3 subunit A 352 494 - -
Pral1244g00001 837 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 441 532 IPR000717 -
Pral1244g00001 837 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 832 IPR027512 GO:0005852
Pral1244g00001 837 MobiDBLite consensus disorder prediction 805 837 - -
Pral1244g00001 837 FunFam Eukaryotic translation initiation factor 3 subunit A 268 342 - -
Pral1244g00001 837 Pfam PCI domain 373 508 IPR000717 -
Pral1244g00001 837 Coils Coil 797 828 - -
Pral1244g00001 837 Gene3D UVR domain 217 267 - -
Pral1244g00001 837 Coils Coil 561 602 - -
Pral1244g00001 837 Gene3D - 268 342 - -
Pral1244g00001 837 Gene3D - 352 493 - -
Pral1244g00001 837 Coils Coil 93 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1244g00001 Pral-Chr1244 691 6240 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1244g00001 1 808 Eukaryotic Initiation Factors Gene Family AT4G11420 78.218 0.0 1274