Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral1242g00001 | ATGTCAGAAGACGAACACGAGATTTATAATGAAAAAAATAAGTGTGATGAGGAAACTTCGCTGGGCTCTTCTTCCCACAAGTGTTCATCGTTCGACTTGAATGAGGAAGCTACCAGTGAAGAAGAGGAAGAACAAGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGAAGGATCGCAGAGATTTAGAAGCAGAAGAAGAGAACGAGAAAATGAAGGAACATGAAGGTACTTCATCATCAAACAGAAGCACATCAAGAGAACGAAATGAAGGAAAAGGCACAGTGAGACAATATGTCAGATCCAAGATGCCTAGGCTTCGCTGGACTCCAGATCTTCATCTTTCTTTTGTTCATGCTGTTAAACGCCTTGGTGGTCAAGAGAGAGCAACACCCAAGTTGGTGCTTCAGCTAATGAATGTGAGGGGACTCAGCATTGCTCATGTGAAGAGTCACTTGCAGATGTATCGGAGTAAAAAACTTGATGAGGCTGGCCAAGTTATAAGTCAAACGTACAGATCGCAAGGTGGTCGTATGTCTCAGTTATCGTATCAATCAGTGAACACAAGGCAACAATTGAAGATGGGAAATGGTGGAATTATTCTAACTACCAATTCCAACGACCATGCTGGCTTTGTTCATCATCATCCTCTCTCCAAGCCTTCTTTTACTCTTTCGCACTCCCATACAATGGCCACTGATTCCAGGCACCAACAATGGCACTTCAATAACCAGTGGTATAGAAGGCAAAGTTGCGTGACAAACAACGAAGTGATGATGATGATGCCCTCAACGACAGACCGAATTGCACCCATGAGACCCAGCCAATTTCTGGAAGAGAAAAGGTGGCCTCCATTAGAAATTACTAGTAATAACAGCAACAACAATAATAATCAGCATTATTATTGGAAGTTCAAGAAAATGCCTCCGACCAGTAATATTATTAACACTTGGGCAGATACTAATATTAGTATTAATGATTCACAATCTGGATTTCACCAACTTGGCACTACGCATGAGCCACCTGATCAATGGAGTTTTGGAAATTTCAAGAGCAATACCAGCAACAGTTCTCAGAGTTTGAAGCTAGAATTTGAGCCCCCATTTCGGATTAAGTTAAATGAAGAGAAAGTAGAGAAAGAAAAGCAATCGTTGCCTGATCTGCAACTGGGATTGAATTATCAGAATGCTGATCGTTGCAAGGAGACCCAAGAAATTAACACTAAGCTTTCCCTTTCTTAA | 1242 | 0.4195 | MSEDEHEIYNEKNKCDEETSLGSSSHKCSSFDLNEEATSEEEEEQEEEEEEEEEEEEKDRRDLEAEEENEKMKEHEGTSSSNRSTSRERNEGKGTVRQYVRSKMPRLRWTPDLHLSFVHAVKRLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDEAGQVISQTYRSQGGRMSQLSYQSVNTRQQLKMGNGGIILTTNSNDHAGFVHHHPLSKPSFTLSHSHTMATDSRHQQWHFNNQWYRRQSCVTNNEVMMMMPSTTDRIAPMRPSQFLEEKRWPPLEITSNNSNNNNNQHYYWKFKKMPPTSNIINTWADTNISINDSQSGFHQLGTTHEPPDQWSFGNFKSNTSNSSQSLKLEFEPPFRIKLNEEKVEKEKQSLPDLQLGLNYQNADRCKETQEINTKLSLS | 413 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral1242g00001 | 413 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Pral1242g00001 | 413 | FunFam | Myb family transcription factor | 103 | 161 | - | - | |
Pral1242g00001 | 413 | Coils | Coil | 30 | 73 | - | - | |
Pral1242g00001 | 413 | Gene3D | - | 104 | 161 | - | - | |
Pral1242g00001 | 413 | MobiDBLite | consensus disorder prediction | 64 | 96 | - | - | |
Pral1242g00001 | 413 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE | 82 | 233 | IPR046955 | GO:0003700 | |
Pral1242g00001 | 413 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 101 | 161 | IPR017930 | - | |
Pral1242g00001 | 413 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 105 | 160 | IPR006447 | GO:0003677 | |
Pral1242g00001 | 413 | MobiDBLite | consensus disorder prediction | 1 | 99 | - | - | |
Pral1242g00001 | 413 | Pfam | Myb-like DNA-binding domain | 107 | 157 | IPR001005 | - | |
Pral1242g00001 | 413 | SUPERFAMILY | Homeodomain-like | 103 | 159 | IPR009057 | - | |
Pral1242g00001 | 413 | MobiDBLite | consensus disorder prediction | 35 | 63 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral1242g00001 | Pral-Chr1242 | 19365 | 25976 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral1242g00001 | 96 | 164 | G2-like Transcription Factor Family | AT2G42660 | 81.159 | 2.24e-34 | 126 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GARP-G2-like | Pral1242g00001 | Myb_DNA-binding | 8.3e-07 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral1242g00001 | - | - | pcin:129286853 | 567 |