Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1239g00028 ATGGCAGTGAGGATACTACACTTCAGCACCAGGCATTGTTCTATTAGCGTGCCTTCGCCGCGATTCCCTACTCGTTTATCTCATCGATCCATTCCTTTTAAACGCGTCTCTTCGCTCTCTAAAAGATTTCGGGTAGTTTTAGCAATGGATGGTGCAAAAGCTGATGCACCTAAGGAAACGCCACTGGGTTTGGATAATATGACTGAGGAAGAATATGCTTATCAGTCTAAGTTACTTCTGGAATTCAATAGCATCTCCAATATTGACAACGCATGGATTTTTAATTCTGACAGTGCACTGCCCGCTCAGGGAATGTTTTGTATTAGCCAACCAAATCTTCTGGCAAACAAGAGAAAGAAGTTCATACTATCCTCTACAATATCTAAAGGAAGTAACAGCTCTGTAGAATTTCATTGGGCTCCATTTCCCATAGAGATGTCTGGAGCATCTAAAGTTGTTCCATCACCTTCTGGCTCAAGACTTCTGGTAGTTCGAAATCCTGAGAATGAAGGTTCTTCTCACCTTGAAATATGGAATTCATCTCACTTGGAAAAGGAATTCCATATCCCCCAGTCAGTGCATGGCTCAGTATATACTGATGGATGGTTTGAGGGAATCTCTTGGAACTTGGATGAAACTTGTATAGCATATGTAGCTGAAGAGCCGTCCCCTGCAAAGCCTGCTTTCAACGATCAGGGCTACAAGAAAGGTGGTTTGACAGACAAGGATAGCGGGAGCTGGAAAGGTCAAGGGGCTTGGGAGGAGAACTGGGGAGAAACATATTCAGGAAAGAGGCAACCTGCGCTTTTTGTTATAAGCATCAAAAGTGGAGAGGTACAATCTGTCAAAGGAATTGACAAATCTTTAAGTGTTGGACAAGTTGTGTGGGCTCCATCAGCACAATATTTAGTATTTGTCGGATGGTCATTTGAGACAAGAAAACTTGGTATGAAGTACTGTTATAATAGACCTTGTGCATTATATGCTGTTAGAGCCCCCGACCATGATTCAAATGCTAATGAAACAGAGATTCAGTCAACTGAAGATTTCCAGGCACTAAACCTAACCCGGACTATAAATAGTGCTTTCTCTCCACGATTCAGCCCAGATGGGAAGTTCCTTGTGTTTTTATCTGCAAAAAGTTCAGTGGATTCTGGAGCCCACTCTGCAACAAATTCACTCCATAGAATTGATTGGCCCTCTGATGTGAAGCAGTACAAATCTGTAAAAGTTTATGATGTGATTCCTGTTGTGATGTGTGCGGAGGATGGTTGCTTCCCTGGGCTGTATTGTTCAACTGTCCTTTCTAATCCTTGGCTTTCTGATGGGTGCACTATGATTTTACCGTCTGTTTGGTGTAGCTGTCAGGTTTTACTTTCAGTGAATGTGTCGAGTGGAGAAGTATCACGTATCACCCCTGCTGACTCAGATTTCTCATGGAGTCTTCTTGCATTGGATGGGAACAATATTATTTCTGTTTTGAGTAGCCCAGTAGATGTTCCTGAAATCAGCTATGGCACCATTATTGAGAAGAAAAATAATGCTAAAGCATGGAGTTGGTCAAATGTACCAAGTCCCATATTCAGATGCTCTGACAAGGTGAGATCCTTGCTGTCCTCTCTTCAGTTCAGTGTAATGAAAATCCCCGTGAAAGTTGCTTCTGACAACCTAACCAAAGGTGCTAGGAAGCCTATTGAAGCTATATTTGTGTCATCAAAAACCAAGAAAAATGATGCATGTGATCCCCTAATTGCAATCCTTCATGGGGGGCCGCACGCTGTCTCAGTTTCAAGTTTTTCAAAGTCACTGGCTTTCTTATCTTCTCTTGCTTATAGTTTGTTGATTGTAAATTACAGAGGTTCGATAGGATTTGGTGAGGAAGCATTACAATCTCTTCCTGGAAAAGCTGGTTCTCAGGATGTTGAAGATGTTATCACTGCCGTAGATCATGTCATTAGCTTAGGACTTGCCAGTCCATCAAAGATTGCAGTGCTGGGTGGTTCGCATGGTGGCTTTCTGACAACCCACCTAATTGGCCAGGCACCAGAGAAGTTTGTTGCGGCAGCTGTGAGAAACCCTGTTTGTAACCTTTCATTGATGGTTGGTATAACTGATATCCCTGACTGGTGCTATGTGGAGTCCTATGGAATAGCTGGCATAGGTAAGTATACAGAAGCACCTTCAGAAGAGGATCTCACTCTTTTTTACAGCAAGTCTCCAATTTCACATCTCTCGAAGGTAAAAACACCAACGCTTTTCCTATTCGGTGCACAAGATCTTCGTGTTCCGATTTCTAATGGATTGCAATATGCGAGGGCCCTAAAGGCCAAAGGAGTTGACACCAAAATAATAGTGTTTCCCAATGATGTTCATGCAATTGACAGGCCACAATCTGACTTTGAAAGCTTCATTAATATTGGTGTATGGTTCAAGAAGTATTGTAAATGA 2448 0.4236 MAVRILHFSTRHCSISVPSPRFPTRLSHRSIPFKRVSSLSKRFRVVLAMDGAKADAPKETPLGLDNMTEEEYAYQSKLLLEFNSISNIDNAWIFNSDSALPAQGMFCISQPNLLANKRKKFILSSTISKGSNSSVEFHWAPFPIEMSGASKVVPSPSGSRLLVVRNPENEGSSHLEIWNSSHLEKEFHIPQSVHGSVYTDGWFEGISWNLDETCIAYVAEEPSPAKPAFNDQGYKKGGLTDKDSGSWKGQGAWEENWGETYSGKRQPALFVISIKSGEVQSVKGIDKSLSVGQVVWAPSAQYLVFVGWSFETRKLGMKYCYNRPCALYAVRAPDHDSNANETEIQSTEDFQALNLTRTINSAFSPRFSPDGKFLVFLSAKSSVDSGAHSATNSLHRIDWPSDVKQYKSVKVYDVIPVVMCAEDGCFPGLYCSTVLSNPWLSDGCTMILPSVWCSCQVLLSVNVSSGEVSRITPADSDFSWSLLALDGNNIISVLSSPVDVPEISYGTIIEKKNNAKAWSWSNVPSPIFRCSDKVRSLLSSLQFSVMKIPVKVASDNLTKGARKPIEAIFVSSKTKKNDACDPLIAILHGGPHAVSVSSFSKSLAFLSSLAYSLLIVNYRGSIGFGEEALQSLPGKAGSQDVEDVITAVDHVISLGLASPSKIAVLGGSHGGFLTTHLIGQAPEKFVAAAVRNPVCNLSLMVGITDIPDWCYVESYGIAGIGKYTEAPSEEDLTLFYSKSPISHLSKVKTPTLFLFGAQDLRVPISNGLQYARALKAKGVDTKIIVFPNDVHAIDRPQSDFESFINIGVWFKKYCK 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1239g00028 815 Pfam Prolyl oligopeptidase family 598 814 IPR001375 GO:0006508|GO:0008236
Pral1239g00028 815 PANTHER SERINE PEPTIDASE S9 FAMILY MEMBER 64 814 - -
Pral1239g00028 815 Pfam WD40-like Beta Propeller Repeat 362 379 IPR011659 -
Pral1239g00028 815 Gene3D alpha/beta hydrolase 557 813 IPR029058 -
Pral1239g00028 815 Gene3D - 260 383 IPR015943 GO:0005515
Pral1239g00028 815 FunFam Acylamino-acid-releasing enzyme 554 814 - -
Pral1239g00028 815 ProSitePatterns Prolyl endopeptidase family serine active site. 643 673 IPR002471 GO:0004252|GO:0006508
Pral1239g00028 815 Pfam Acylamino-acid-releasing enzyme, N-terminal domain 68 336 IPR045550 -
Pral1239g00028 815 SUPERFAMILY DPP6 N-terminal domain-like 148 499 - -
Pral1239g00028 815 SUPERFAMILY alpha/beta-Hydrolases 576 814 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1239g00028 Pral-Chr1239 556896 569291 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1239g00028 461 798 Carbohydrate Esterase AT5G36210 24.198 3.77e-17 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1239g00028 K01303 - qsa:O6P43_021499 1199.11