Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1239g00027 ATGGCAGTGAGGATACTACACTTCAGCACCAGGCATTGTTCTATTAGCGTGCCTTCGCCGCGATTCCCTACTCGTTTATCTCATCGATCCATTCCTTTTAAACGCGTCTCTTCGCTCTCTAAAAGATTTCGGGTAGTTTTAGCAATGGATGGTGCAAAAGCTGATGCACCTAAGGAAACGCCACTGGGTTTGGATAATATGACTGAGGAAGAATATGCTTATCAGTCTAAGTTACTTCTGGAATTCAATAGCATCTCCAATATTGACAACGCATGGATTTTTAATTCTGACAGTGCACTGCCCGCTCAGGGAATGTTTTGTATTAGCCAACCAAATCTTCTGGCAAACAAGAGAAAGAAGTTCATACTATCCTCTACAATATCTAAAGGAAGTAACAGCTCTGTAGAATTTCATTGGGCTCCATTTCCCATAGAGATGTCTGGAGCATCTAAAGTTGTTCCATCACCTTCTGGCTCAAGACTTCTGGTAGTTCGAAATCCTGAGAATGAAGGTTCTTCTCACCTTGAAATATGGAATTCATCTCACTTGGAAAAGGAATTCCATATCCCCCAGTCAGTGCATGGCTCAGTATATACTGATGGATGGTTTGAGGGAATCTCTTGGAACTTGGATGAAACTTGTATAGCATATGTAGCTGAAGAGCCGTCCCCTGCAAAGCCTGCTTTCAACGATCAGGGCTACAAGAAAGGTGGTTTGACAGACAAGGATAGCGGGAGCTGGAAAGGTCAAGGGGCTTGGGAGGAGAACTGGGGAGAAACATATTCAGGAAAGAGGCAACCTGCGCTTTTTGTTATAAGCATCAAAAGTGGAGAGGTACAATCTGTCAAAGGAATTGACAAATCTTTAAGTGTTGGACAAGTTGTGTGGGCTCCATCAGCACAATATTTAGTATTTGTCGGATGGTCATTTGAGACAAGAAAACTTGGTATGAAGTACTGTTATAATAGACCTTGTGCATTATATGCTGTTAGAGCCCCCGACCATGATTCAAATGCTAATGAAACAGAGATTCAGTCAACTGAAGATTTCCAGGCACTAAACCTAACCCGGACTATAAATAGTGCTTTCTCTCCACGATTCAGCCCAGATGGGAAGTTCCTTGTGTTTTTATCTGCAAAAAGTTCAGTGGATTCTGGAGCCCACTCTGCAACAAATTCACTCCATAGAATTGATTGGCCCTCTGATGTGAAGCAGTACAAATCTGTAAAAGTTTATGATGTGATTCCTGTTGTGATGTGTGCGGAGGATGGTTGCTTCCCTGGGCTGTATTGTTCAACTGTCCTTTCTAATCCTTGGCTTTCTGATGGGTGCACTATGATTTTACCGTCTGTTTGGTGTAGCTGTCAGGTTTTACTTTCAGTGAATGTGTCGAGTGGAGAAGTATCACGTATCACCCCTGCTGACTCAGATTTCTCATGGAGTCTTCTTGCATTGGATGGGAACAATATTATTTCTGTTTTGAGTAGCCCAGTAGATGTTCCTGAAATCAGCTATGGCACCATTATTGAGAAGAAAAATAATGCTAAAGCATGGAGTTGGTCAAATGTACCAAGTCCCATATTCAGATGCTCTGACAAGGTGAGATCCTTGCTGTCCTCTCTTCAGTTCAGTGTAATGAAAATCCCCGTGAAAGTTGCTTCTGACAACCTAACCAAAGGTGCTAGGAAGCCTATTGAAGCTATATTTGTGTCATCAAAAACCAAGAAAAATGATGCATGTGATCCCCTAATTGCAATCCTTCATGGGGGGCCGCACGCTGTCTCAGTTTCAAGTTTTTCAAAGTCACTGGCTTTCTTATCTTCTCTTGCTTATAGTTTGTTGATTGTAAATTACAGAGGTTCGATAGGATTTGGTGAGGAAGCATTACAATCTCTTCCTGGAAAAGCTGGTTCTCAGGATGTTGAAGATGTTATCACTGCCGTAGATCATGTCATTAGCTTAGGACTTGCCAGTCCATCAAAGATTGCAGTGCTGGGTGGTTCGCATGGTGGCTTTCTGACAACCCACCTAATTGGCCAGGCACCAGAGAAGTTTGTTGCGGCAGCTGTGAGAAACCCTGTTTGTAACCTTTCATTGATGGTTGGTATAACTGATATCCCTGACTGGTGCTATGTGGAGTCCTATGGAATAGCTGGCATAGGTAAGTATACAGAAGCACCTTCAGAAGAGGATCTCACTCTTTTTTACAGCAAGTCTCCAATTTCACATCTCTCGAAGGTAAAAACACCAACGCTTTTCCTATTCGGTGCACAAGATCTTCGTGTTCCGATTTCTAATGGATTGCAAGACTAA 2313 0.4259 MAVRILHFSTRHCSISVPSPRFPTRLSHRSIPFKRVSSLSKRFRVVLAMDGAKADAPKETPLGLDNMTEEEYAYQSKLLLEFNSISNIDNAWIFNSDSALPAQGMFCISQPNLLANKRKKFILSSTISKGSNSSVEFHWAPFPIEMSGASKVVPSPSGSRLLVVRNPENEGSSHLEIWNSSHLEKEFHIPQSVHGSVYTDGWFEGISWNLDETCIAYVAEEPSPAKPAFNDQGYKKGGLTDKDSGSWKGQGAWEENWGETYSGKRQPALFVISIKSGEVQSVKGIDKSLSVGQVVWAPSAQYLVFVGWSFETRKLGMKYCYNRPCALYAVRAPDHDSNANETEIQSTEDFQALNLTRTINSAFSPRFSPDGKFLVFLSAKSSVDSGAHSATNSLHRIDWPSDVKQYKSVKVYDVIPVVMCAEDGCFPGLYCSTVLSNPWLSDGCTMILPSVWCSCQVLLSVNVSSGEVSRITPADSDFSWSLLALDGNNIISVLSSPVDVPEISYGTIIEKKNNAKAWSWSNVPSPIFRCSDKVRSLLSSLQFSVMKIPVKVASDNLTKGARKPIEAIFVSSKTKKNDACDPLIAILHGGPHAVSVSSFSKSLAFLSSLAYSLLIVNYRGSIGFGEEALQSLPGKAGSQDVEDVITAVDHVISLGLASPSKIAVLGGSHGGFLTTHLIGQAPEKFVAAAVRNPVCNLSLMVGITDIPDWCYVESYGIAGIGKYTEAPSEEDLTLFYSKSPISHLSKVKTPTLFLFGAQDLRVPISNGLQD 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1239g00027 770 Pfam Acylamino-acid-releasing enzyme, N-terminal domain 68 336 IPR045550 -
Pral1239g00027 770 SUPERFAMILY alpha/beta-Hydrolases 576 768 IPR029058 -
Pral1239g00027 770 Gene3D - 260 383 IPR015943 GO:0005515
Pral1239g00027 770 PANTHER SERINE PEPTIDASE S9 FAMILY MEMBER 64 769 - -
Pral1239g00027 770 SUPERFAMILY DPP6 N-terminal domain-like 149 499 - -
Pral1239g00027 770 Gene3D alpha/beta hydrolase 549 769 IPR029058 -
Pral1239g00027 770 ProSitePatterns Prolyl endopeptidase family serine active site. 643 673 IPR002471 GO:0004252|GO:0006508
Pral1239g00027 770 Pfam Prolyl oligopeptidase family 598 768 IPR001375 GO:0006508|GO:0008236
Pral1239g00027 770 Pfam WD40-like Beta Propeller Repeat 362 379 IPR011659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1239g00027 Pral-Chr1239 556893 568605 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1239g00027 461 759 Carbohydrate Esterase AT5G36210 25.000 6.35e-14 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1239g00027 K01303 - qsa:O6P43_021499 1115.14