Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral1237g00002 | ATGGCTTCCTTTAATCTCCTTCCTCCTCTAACTCATCTCCCTCTGCTGGCCACTTTATTTGTTACAGTTTTTTCCTTTCAGACTTCCATCAAAGCATCTTATGTAGTCCATTTTAAATGCTCTGCGAAAATCAACACATGTAATGCCTTACTCTACCACATAAACCAAGGTCTTGACATAGAAGACATAGCCTCTCTTTACTCTGTTAATTCATCCCAAATCCAACCAATAACAAGGGGGGCCAATCAAGACTATCTCATAACTGTCCCTTGTTCTTGTAAAGCCGTCACAAACCTTAGGGGATATTTCTTTGACACAACATACACAGTGCAGCAAGATGAGACATATATGAATATCTCAAACTTCTATTACAGCGGACAAGCCTGGTCTCCTACTGATAATCTGACCACAGGTGAAAACTTAACAATACATCTTCCCTGTGGATGTACAGAAAGTGATTCTCAAATCATTGTGACATATACGGTCCAGCAGAATGATACAACAGCAGAAATCGCCAATTTGCTATCAGCTACGCTTACTGGCATTCAGAACATGAATGGAGTTTTAGCTAATAGGCCTTCATTCATAGATGTGGGTTGGGTGTTATATGTTCCTAAGGAGCTCAATGGGATTCCATCTTCAAAAGGAAGTGGAAAGAAACGAAAGCGTTCCATTATCATTGGTGTCTTGGCGGGTGTGGCATTACTTTCTGCTATCACAATAACCATTCTCATTCGATGGAGAAAAAGAGCCACTGAAACCAGCAATGAAGATGCAAAAGCTGTATCGAAAAGATCAACTTCAAAAGCATTTTCTAAACGATCGATTTCCAATAGAACTCTTTCCTTAAAGAACCATCAGTTTCATATAGAAACTATAGAAGAAGTAACATCAATTGACTCAGAAAGACCAGTAACATTTTATCTTGAGGAGATTGAGGAGGCCATAAACAAAGAAGGTAAAATAATAGGAAAGGGCGGATATGGGACTGTGTATTTTGGAATTTTAGGAGATAAGGAGGTTGCTATAAAAGAGATGAGGTCTAGTAAATCCAAAGAGTTCTATGCAGAACTGAAGGTCTTATGCAGGATCCATCATATCAACATTGTGGAGCTATTGGGATATGCCAGTGGAGAAGATAACCTCTATTTAGTGTATGAGTATGTTTCAAAAGGATCTCTCAGTGACCATCTTCACGATCCATTTCTAAAAGGTCATGAACCTCTTTCATGGACTGTTAGAGCACAGATTGCTCTGGATGCTGCAAAAGGTCTTGAGTACATACATGATTACACAAAAGCACGGCATGTGCACCGAGATATCAAGACTAGCAATATTCTTCTCGACAATAAACTCAGAGCCAAGATTGCAGATTTTGGACTAGTAAAGCTGGTAGAACGAACAAACGATGATGATTTTATAGCAACAAGGCTTGTTGGAACACCAGGCTACCTTCCCCCGGAATCTGTGAAGGAGCTTCAGCTGACCTCAAAAACCGACGTTTTTGCATTTGGAGTAGTTCTAGCAGAGCTAGTAACAGGGAAACCTGCTCTATTTCGTGACAGCCAAGAAACCTGCAGAATGAGATCGCTCATTTCTGTCATCAATAAAGTATTTGAAGCTAATGACCCAGAGAGTGCTTTAGAGGATATCATAGACAAAAACCTTCGAGATACCTATCCTGTGGAGGATGTCTTCAAGATGATAGAAGTAGCTGAAAGATGCTTGCGTGAGGAACCAACAGAGAGGCCAGAAATGAGGGAGATTGTGTTGATTTTGTCACAGATTTTGATGTCCTCCACAGAATGGGAAGCATCATTAGGTGGAAACAGTGAAGTCTTTAGCGGCGTATTTACTGGAAGATGA | 1866 | 0.403 | MASFNLLPPLTHLPLLATLFVTVFSFQTSIKASYVVHFKCSAKINTCNALLYHINQGLDIEDIASLYSVNSSQIQPITRGANQDYLITVPCSCKAVTNLRGYFFDTTYTVQQDETYMNISNFYYSGQAWSPTDNLTTGENLTIHLPCGCTESDSQIIVTYTVQQNDTTAEIANLLSATLTGIQNMNGVLANRPSFIDVGWVLYVPKELNGIPSSKGSGKKRKRSIIIGVLAGVALLSAITITILIRWRKRATETSNEDAKAVSKRSTSKAFSKRSISNRTLSLKNHQFHIETIEEVTSIDSERPVTFYLEEIEEAINKEGKIIGKGGYGTVYFGILGDKEVAIKEMRSSKSKEFYAELKVLCRIHHINIVELLGYASGEDNLYLVYEYVSKGSLSDHLHDPFLKGHEPLSWTVRAQIALDAAKGLEYIHDYTKARHVHRDIKTSNILLDNKLRAKIADFGLVKLVERTNDDDFIATRLVGTPGYLPPESVKELQLTSKTDVFAFGVVLAELVTGKPALFRDSQETCRMRSLISVINKVFEANDPESALEDIIDKNLRDTYPVEDVFKMIEVAERCLREEPTERPEMREIVLILSQILMSSTEWEASLGGNSEVFSGVFTGR | 621 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral1237g00002 | 621 | PANTHER | CHITIN ELICITOR RECEPTOR KINASE 1-RELATED | 23 | 617 | IPR044812 | GO:0019199|GO:0045087 | |
Pral1237g00002 | 621 | Gene3D | Phosphorylase Kinase; domain 1 | 288 | 388 | - | - | |
Pral1237g00002 | 621 | SUPERFAMILY | Protein kinase-like (PK-like) | 318 | 593 | IPR011009 | - | |
Pral1237g00002 | 621 | Gene3D | LysM domain | 148 | 210 | IPR036779 | - | |
Pral1237g00002 | 621 | ProSiteProfiles | LysM domain profile. | 158 | 204 | IPR018392 | - | |
Pral1237g00002 | 621 | Pfam | LysM domain | 160 | 205 | IPR018392 | - | |
Pral1237g00002 | 621 | Pfam | Protein kinase domain | 319 | 590 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pral1237g00002 | 621 | ProSitePatterns | Protein kinases ATP-binding region signature. | 323 | 344 | IPR017441 | GO:0005524 | |
Pral1237g00002 | 621 | Gene3D | Transferase(Phosphotransferase) domain 1 | 389 | 610 | - | - | |
Pral1237g00002 | 621 | SMART | serkin_6 | 317 | 598 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pral1237g00002 | 621 | FunFam | PTI1-like tyrosine-protein kinase 3 | 389 | 607 | - | - | |
Pral1237g00002 | 621 | SUPERFAMILY | LysM domain | 158 | 205 | IPR036779 | - | |
Pral1237g00002 | 621 | ProSiteProfiles | Protein kinase domain profile. | 317 | 597 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral1237g00002 | Pral-Chr1237 | 11809 | 15824 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral1237g00002 | 302 | 621 | Receptor kinase-like Gene Family | AT1G51940 | 51.368 | 2.28e-113 | 352 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LysM | Pral1237g00002 | Pkinase | 3.5e-51 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral1237g00002 | - | - | gmx:100800907 | 772.311 |