Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1237g00002 ATGGCTTCCTTTAATCTCCTTCCTCCTCTAACTCATCTCCCTCTGCTGGCCACTTTATTTGTTACAGTTTTTTCCTTTCAGACTTCCATCAAAGCATCTTATGTAGTCCATTTTAAATGCTCTGCGAAAATCAACACATGTAATGCCTTACTCTACCACATAAACCAAGGTCTTGACATAGAAGACATAGCCTCTCTTTACTCTGTTAATTCATCCCAAATCCAACCAATAACAAGGGGGGCCAATCAAGACTATCTCATAACTGTCCCTTGTTCTTGTAAAGCCGTCACAAACCTTAGGGGATATTTCTTTGACACAACATACACAGTGCAGCAAGATGAGACATATATGAATATCTCAAACTTCTATTACAGCGGACAAGCCTGGTCTCCTACTGATAATCTGACCACAGGTGAAAACTTAACAATACATCTTCCCTGTGGATGTACAGAAAGTGATTCTCAAATCATTGTGACATATACGGTCCAGCAGAATGATACAACAGCAGAAATCGCCAATTTGCTATCAGCTACGCTTACTGGCATTCAGAACATGAATGGAGTTTTAGCTAATAGGCCTTCATTCATAGATGTGGGTTGGGTGTTATATGTTCCTAAGGAGCTCAATGGGATTCCATCTTCAAAAGGAAGTGGAAAGAAACGAAAGCGTTCCATTATCATTGGTGTCTTGGCGGGTGTGGCATTACTTTCTGCTATCACAATAACCATTCTCATTCGATGGAGAAAAAGAGCCACTGAAACCAGCAATGAAGATGCAAAAGCTGTATCGAAAAGATCAACTTCAAAAGCATTTTCTAAACGATCGATTTCCAATAGAACTCTTTCCTTAAAGAACCATCAGTTTCATATAGAAACTATAGAAGAAGTAACATCAATTGACTCAGAAAGACCAGTAACATTTTATCTTGAGGAGATTGAGGAGGCCATAAACAAAGAAGGTAAAATAATAGGAAAGGGCGGATATGGGACTGTGTATTTTGGAATTTTAGGAGATAAGGAGGTTGCTATAAAAGAGATGAGGTCTAGTAAATCCAAAGAGTTCTATGCAGAACTGAAGGTCTTATGCAGGATCCATCATATCAACATTGTGGAGCTATTGGGATATGCCAGTGGAGAAGATAACCTCTATTTAGTGTATGAGTATGTTTCAAAAGGATCTCTCAGTGACCATCTTCACGATCCATTTCTAAAAGGTCATGAACCTCTTTCATGGACTGTTAGAGCACAGATTGCTCTGGATGCTGCAAAAGGTCTTGAGTACATACATGATTACACAAAAGCACGGCATGTGCACCGAGATATCAAGACTAGCAATATTCTTCTCGACAATAAACTCAGAGCCAAGATTGCAGATTTTGGACTAGTAAAGCTGGTAGAACGAACAAACGATGATGATTTTATAGCAACAAGGCTTGTTGGAACACCAGGCTACCTTCCCCCGGAATCTGTGAAGGAGCTTCAGCTGACCTCAAAAACCGACGTTTTTGCATTTGGAGTAGTTCTAGCAGAGCTAGTAACAGGGAAACCTGCTCTATTTCGTGACAGCCAAGAAACCTGCAGAATGAGATCGCTCATTTCTGTCATCAATAAAGTATTTGAAGCTAATGACCCAGAGAGTGCTTTAGAGGATATCATAGACAAAAACCTTCGAGATACCTATCCTGTGGAGGATGTCTTCAAGATGATAGAAGTAGCTGAAAGATGCTTGCGTGAGGAACCAACAGAGAGGCCAGAAATGAGGGAGATTGTGTTGATTTTGTCACAGATTTTGATGTCCTCCACAGAATGGGAAGCATCATTAGGTGGAAACAGTGAAGTCTTTAGCGGCGTATTTACTGGAAGATGA 1866 0.403 MASFNLLPPLTHLPLLATLFVTVFSFQTSIKASYVVHFKCSAKINTCNALLYHINQGLDIEDIASLYSVNSSQIQPITRGANQDYLITVPCSCKAVTNLRGYFFDTTYTVQQDETYMNISNFYYSGQAWSPTDNLTTGENLTIHLPCGCTESDSQIIVTYTVQQNDTTAEIANLLSATLTGIQNMNGVLANRPSFIDVGWVLYVPKELNGIPSSKGSGKKRKRSIIIGVLAGVALLSAITITILIRWRKRATETSNEDAKAVSKRSTSKAFSKRSISNRTLSLKNHQFHIETIEEVTSIDSERPVTFYLEEIEEAINKEGKIIGKGGYGTVYFGILGDKEVAIKEMRSSKSKEFYAELKVLCRIHHINIVELLGYASGEDNLYLVYEYVSKGSLSDHLHDPFLKGHEPLSWTVRAQIALDAAKGLEYIHDYTKARHVHRDIKTSNILLDNKLRAKIADFGLVKLVERTNDDDFIATRLVGTPGYLPPESVKELQLTSKTDVFAFGVVLAELVTGKPALFRDSQETCRMRSLISVINKVFEANDPESALEDIIDKNLRDTYPVEDVFKMIEVAERCLREEPTERPEMREIVLILSQILMSSTEWEASLGGNSEVFSGVFTGR 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1237g00002 621 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 23 617 IPR044812 GO:0019199|GO:0045087
Pral1237g00002 621 Gene3D Phosphorylase Kinase; domain 1 288 388 - -
Pral1237g00002 621 SUPERFAMILY Protein kinase-like (PK-like) 318 593 IPR011009 -
Pral1237g00002 621 Gene3D LysM domain 148 210 IPR036779 -
Pral1237g00002 621 ProSiteProfiles LysM domain profile. 158 204 IPR018392 -
Pral1237g00002 621 Pfam LysM domain 160 205 IPR018392 -
Pral1237g00002 621 Pfam Protein kinase domain 319 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1237g00002 621 ProSitePatterns Protein kinases ATP-binding region signature. 323 344 IPR017441 GO:0005524
Pral1237g00002 621 Gene3D Transferase(Phosphotransferase) domain 1 389 610 - -
Pral1237g00002 621 SMART serkin_6 317 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1237g00002 621 FunFam PTI1-like tyrosine-protein kinase 3 389 607 - -
Pral1237g00002 621 SUPERFAMILY LysM domain 158 205 IPR036779 -
Pral1237g00002 621 ProSiteProfiles Protein kinase domain profile. 317 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1237g00002 Pral-Chr1237 11809 15824 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1237g00002 302 621 Receptor kinase-like Gene Family AT1G51940 51.368 2.28e-113 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pral1237g00002 Pkinase 3.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1237g00002 - - gmx:100800907 772.311