Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1236g00012 ATGGCAGACTTTATGCTTGTGTTGGTGAAGAATGCTTGGAGTATTTTGAATGAAGTTCGAAGGTACAGAAAGAGTCGTGAAAGGCTCACGTCAACCACCAAGCGCCTGGGTGCGGTGATTCGACAGATGGAACAGGGAATGAGGGGGATGGAACGCAGAGATATTGATCGTCTAACTCAATTAGTGCAGAATCTTAAAGGCTTGAACGAAGCAAACCAAGAGGTCCTTGATAAGAACGAAGTCCTTTGGTGGAATTTCTGCCTTCTATCATGTTTTCGGAGCAAACATGAAGATACGTATCAATCGGCTGTGATGTACGTCATGTTCGAGGTGCTGCTACCCGAGATGGGAGGCCGTTTGATAGAACTCGAATCCAGGTTGACTAATGATGGAAGCCAAACCATGGCAGCTCCAGCCCAAGAGACTTATAGTAACATCAGACCCATATTCACCAAATTTACGGTGAAATTGGGGAGTCAAAGTCATATTATGGACAAGTTGAAGATTATGCTGCTTACTGACCGTGGATCGCAGACGCTGAACTTGTATGGTTTGCCCGGTTCCGGTAAGACCACTTTGGCTGAAAATCTCTGCCAAGACAAGGAAGTCAGAGATCACTTCAAAGATAGCATCATCTTTGAGACTCTGGGATCACAGATTCAAAGCAATGAAGCTTCCATCAGATTGTCCAAAATTCCGGATTCAAAACTATTGGTACTGGATGATGTTTGGCCTGCCTGCGAAAATATCATTGAGGACTTGAAAGGTAAAAGACCGGGTTGTAAAATTTTGGTGACTTCAAGATATCAAATTACAAAAGTTGGCACCCGGTGCCACATGGAATTACTTTCTCTCGAAGATGCAGAAGCCCTTTTCCTTCACTTTGTTCGACCAACTGAAATCGATCTTGATGACCAGGGAATACGTCAAATGCTCCTACAGATTGTTGAAGGTTGCAAGGGCTTACCATTCGCCATTGAATTTCTTGGTCGCAATCTCCAAGGGAAAACTACTGAAGAGTTTCAATGGGTGCAACCAACATTGTTGCAAGGCTCAATTCTAGATTCACATGAAGAGTTGCTTGCTCAACTCCAACATTGGTTGCATCAATTCGTAGGTGAAACCCCCCGGGAGTGCTTTATGGACCTTGTGTTATTTCCTGAAGATGAAAAAATCCCCATTACTTCATTAATAGACATGTGGATTGAACTGTACAAAATGGATGAACGTGGCATATATGCTATGACTGTCATCCGCAAATTAACAACCCTGAGTTTAGTTGCCGGGGTCAATGTGCGAAGGACTGTTCAAAGCGATCTAGACAATTACTACAATCACCACTTTCTCAAGCAGCATGATCTTCTTAGAGAGCTAGCCATCCGTATAAACAATGAGGAACCATTTGAGATTAGGAGAAGACTGATCATTGACATGTTTGGAAATCAGCGTCCTAAGTCATGGCCCCATCGCCATCAACAGCAGCAACAAGGGATCGATGACCACTCATTAAGTTGTTTTACCAAATGGTTTGGAGACCCGAGCCAGCTCAGAGGAAAGGCTAAGATACTTTCAATATCAACTGATCAAAACACTGCTTCAGAATGGTGCGACATTCAAGCAGATGATGCTGTCGTTCTGATTTTAAATCTTAAAACTACAAGATACACGTTGCCTAAATTCATCGAGAAAATGAGAAACCTGAGAGTTCTTATCATCACCAATTATGGTCTGGGTTTCACTGAATTGGAAAACCCAGGACTACTTGATTCCCTACTGCAACTGAGAAGAATCAGATTGCAGCGGGTTTCACTTCCTTACCTATGCAAAATGAAGAACCTCCACAAGTTATCTCTTTACATGTGTGAAGTGCAGAAGGCTTTTGAAAATAACCCCATCGAATTCTCAGAAGCAATGCCGAATCTGGTGGAGTTGAACATTGATTACTGCAAAGATTTGGTGAAGTTGCCTGTTGGACTTTGCAATACAATCACCCTGAAGAAACTCAGCATCAGTAGTTGCCACAAGTTTATCGAAATTCCCCAAGAAATTGGGAACCTTGAGAACTTGGAATTACTAAGAATCAGTCACTGTGTTGAGTTTAAGGAGATGCCAGAGTCGATCACAAAATTGAAGAGTCTAACCTTTCTTGACATTTCACATTGCACCAGACTTGTGCAATTACCGGACAATATCGGCGAGCTAAGGATCCTAAAAAGCCTGTACATGACGCGTTGTCCGGTAGAAAAATTGCCAGATTCGATCGTCCATCTGGAACATTTAAAGAGTGTGATATGCGATGAAGATACTTACCCTCAGTGGGAAACGATCAAATCGCTCCGTCGAGGACTATGCGTAAAGAAGGCTGCGGACGTAGATTTAAATTGGCTTCTTGATGATCCTTCTTCATCAGGCCTCAACCTTTGA 2424 0.4282 MADFMLVLVKNAWSILNEVRRYRKSRERLTSTTKRLGAVIRQMEQGMRGMERRDIDRLTQLVQNLKGLNEANQEVLDKNEVLWWNFCLLSCFRSKHEDTYQSAVMYVMFEVLLPEMGGRLIELESRLTNDGSQTMAAPAQETYSNIRPIFTKFTVKLGSQSHIMDKLKIMLLTDRGSQTLNLYGLPGSGKTTLAENLCQDKEVRDHFKDSIIFETLGSQIQSNEASIRLSKIPDSKLLVLDDVWPACENIIEDLKGKRPGCKILVTSRYQITKVGTRCHMELLSLEDAEALFLHFVRPTEIDLDDQGIRQMLLQIVEGCKGLPFAIEFLGRNLQGKTTEEFQWVQPTLLQGSILDSHEELLAQLQHWLHQFVGETPRECFMDLVLFPEDEKIPITSLIDMWIELYKMDERGIYAMTVIRKLTTLSLVAGVNVRRTVQSDLDNYYNHHFLKQHDLLRELAIRINNEEPFEIRRRLIIDMFGNQRPKSWPHRHQQQQQGIDDHSLSCFTKWFGDPSQLRGKAKILSISTDQNTASEWCDIQADDAVVLILNLKTTRYTLPKFIEKMRNLRVLIITNYGLGFTELENPGLLDSLLQLRRIRLQRVSLPYLCKMKNLHKLSLYMCEVQKAFENNPIEFSEAMPNLVELNIDYCKDLVKLPVGLCNTITLKKLSISSCHKFIEIPQEIGNLENLELLRISHCVEFKEMPESITKLKSLTFLDISHCTRLVQLPDNIGELRILKSLYMTRCPVEKLPDSIVHLEHLKSVICDEDTYPQWETIKSLRRGLCVKKAADVDLNWLLDDPSSSGLNL 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1236g00012 807 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 7 796 IPR039203 GO:0050832
Pral1236g00012 807 Pfam NB-ARC domain 163 222 IPR002182 GO:0043531
Pral1236g00012 807 Pfam NB-ARC domain 236 344 IPR002182 GO:0043531
Pral1236g00012 807 SUPERFAMILY RNI-like 555 765 - -
Pral1236g00012 807 PRINTS Disease resistance protein signature 179 194 - -
Pral1236g00012 807 PRINTS Disease resistance protein signature 319 333 - -
Pral1236g00012 807 PRINTS Disease resistance protein signature 708 724 - -
Pral1236g00012 807 Gene3D - 372 460 IPR036388 -
Pral1236g00012 807 Gene3D - 155 232 IPR027417 -
Pral1236g00012 807 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 383 IPR027417 -
Pral1236g00012 807 Gene3D - 283 359 IPR042197 -
Pral1236g00012 807 Coils Coil 58 78 - -
Pral1236g00012 807 Gene3D Ribonuclease Inhibitor 502 781 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1236g00012 Pral-Chr1236 370571 375034 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1236g00012 590 764 WRKY Transcription Factor Family AT4G12020 28.141 1.06e-10 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1236g00012 - - pcin:129290628 682.559