Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1236g00011 ATGCTGATGGAGAAATACGAGCTGGGCCGTTTGCTCGGCCAAGGCACATTTGCCAAAGTCTACCACGCCAGAAACATCAAAACCAACCAGAGCGTCGCCATTAAAGTCATCAACAAGCAGAAAATTCTTCGCATCGGCTTGATCGACCAAATCAAGCGTGAGATCTCCGGCATGCACCTTGTAAGGCACCCAAACGTTGTTCAGCTCTATGAAGTTATGGCGAGCAAAAACAAGATTTACTTCGCCATGGAGTACGTCAAAGGCGGCGAGCTCTTCGCCAAAGTCGCCAAAGGGAAATTGAAGGAGGATTTGGCGCGAAAGTATTTCCAGCAGCTAATCGGTGCGGTTGATTTCTGCCATAGCCGAGGGGTTTATCACCGAGATCTGAAGCCGGAGAATCTGCTTCTGGACGAAAATGGGGATCTGAAGATTTCGGATTTTGGGTTGAGTGCTTTGTATGAACCCAGAAAGAACGATGGTCTTCTCTATACAACTTGTGGAACACCAGCTTATGTAGCCCCTGAAGTGCTTAACAAGAAAGGCTATGATGGAGCCAAAGCTGATATATGGTCTTGTGGGGTTATTCTGTTTGTTCTTCTTGCAGGCTTTCTTCCATTTCAGGATAAGAATCTGATTGAAATGTATAGGAAGATTTGTACTGCAGAATTCAAGTGTCCTAAATGGTTCTCACATCAAACCACAAGACTTATCACCAGAATTCTGGATCCAAATCCAAGAACAAGGGTAAGTATTGCTAAGATTATGGAAAATGGCTGGTTTAAAATTGGGTATCAGCAGATTGAACCACCCAAATCACCAGTTTCCAATCCTACGAGTGATGTTCAGGCTCTTTTTGATTCTCCATCATCATCAAGTCCAGAGGAAAAAACCAAAGAAACCCCAGTGAAAGTGAAACCATCTGCCTTCAATGCCTTCGATTTAATATCCCTATCGTCAGGATTTGATCTCTCTGGTTTGTTTGAGGAAGATACGTGTCGGAGACAACATGCTAGATTCACCACCACGAAGCCCGCCTCAACAATTGTTTCAAAACTGGAAGAAATAGCACAAGCAGAGAGAAAATTCAATGTTGTGAAGAAAGACGGATTAGTGAGGTTGGAGGGAAGCAAGAGTGGTCGGAAGGGACAACTTGGTATTGATGCAGAGATTTTTGAGGTGACATCAACGTTTCATGTCGTGGAGGTGAAGAAAACTGCCGGCGATACGTTTGAGTATATCCAATTTAGGGATCAGAACTTGAAGCCTTCATTGAAGGATATAGTGTGGGCTTGGCAAGGAAGTGAACAGTAG 1311 0.4416 MLMEKYELGRLLGQGTFAKVYHARNIKTNQSVAIKVINKQKILRIGLIDQIKREISGMHLVRHPNVVQLYEVMASKNKIYFAMEYVKGGELFAKVAKGKLKEDLARKYFQQLIGAVDFCHSRGVYHRDLKPENLLLDENGDLKISDFGLSALYEPRKNDGLLYTTCGTPAYVAPEVLNKKGYDGAKADIWSCGVILFVLLAGFLPFQDKNLIEMYRKICTAEFKCPKWFSHQTTRLITRILDPNPRTRVSIAKIMENGWFKIGYQQIEPPKSPVSNPTSDVQALFDSPSSSSPEEKTKETPVKVKPSAFNAFDLISLSSGFDLSGLFEEDTCRRQHARFTTTKPASTIVSKLEEIAQAERKFNVVKKDGLVRLEGSKSGRKGQLGIDAEIFEVTSTFHVVEVKKTAGDTFEYIQFRDQNLKPSLKDIVWAWQGSEQ 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1236g00011 436 CDD CIPK_C 310 425 - -
Pral1236g00011 436 SMART serkin_6 6 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1236g00011 436 FunFam Non-specific serine/threonine protein kinase 1 85 - -
Pral1236g00011 436 MobiDBLite consensus disorder prediction 270 302 - -
Pral1236g00011 436 Gene3D Phosphorylase Kinase; domain 1 1 90 - -
Pral1236g00011 436 Gene3D Transferase(Phosphotransferase) domain 1 91 265 - -
Pral1236g00011 436 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 2 413 - -
Pral1236g00011 436 ProSitePatterns Protein kinases ATP-binding region signature. 12 35 IPR017441 GO:0005524
Pral1236g00011 436 Gene3D Kinase associated domain 1, KA1 304 430 - -
Pral1236g00011 436 FunFam Non-specific serine/threonine protein kinase 1 301 - -
Pral1236g00011 436 FunFam Non-specific serine/threonine protein kinase 304 429 - -
Pral1236g00011 436 ProSiteProfiles NAF domain profile. 304 328 IPR018451 GO:0007165
Pral1236g00011 436 MobiDBLite consensus disorder prediction 270 291 - -
Pral1236g00011 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Pral1236g00011 436 CDD STKc_SnRK3 5 259 - -
Pral1236g00011 436 ProSiteProfiles Protein kinase domain profile. 6 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1236g00011 436 Pfam NAF domain 306 365 IPR004041 GO:0007165
Pral1236g00011 436 SUPERFAMILY Protein kinase-like (PK-like) 2 311 IPR011009 -
Pral1236g00011 436 Pfam Protein kinase domain 6 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1236g00011 Pral-Chr1236 347572 349169 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1236g00011 1 433 CBL-interacting serine-threonine protein kinases AT5G45820 68.265 0.0 616
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pral1236g00011 Pkinase 1.3e-73 CL0016