Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1236g00010 ATGGCGGACGTCGACGTTTCGAACAACGGTCTCAATCGGACGAAGAAGAAGAATAACGCCAATCTTTTACTCGGCCGCTATGAAGTAGGAAAACTCCTCGGCCATGGCACCTTCGCGAAGGTTTACTACGCTCGAAACATCAAAACCGACGAAGAAGTCGCAATTAAGATCATCGACAAAGAGAAAATCCTCAAGGGCGGCTTAGTCGCTCACATCAAGCGCGAGATCTCAATCCTCCGCCGCGTCCGCCACCCCAACATCGTCCAGCTCTTCGAAGTCATGGCCACGAAGACGAAGATCTACTTCGTCATGGAATACGTCCGCGGCGGTGAGTTATTCAATAAAGTCGCAAAAGGCCGATTGAAGGAAGGAGTCGCCAGAAAGTATTTCCAGCAATTGATCTCCGCCGTAGAATTCTGCCACGCCAGAGGCGTGTACCACCGCGATCTCAAGCCAGAAAACTTGTTACTCGACGAAAACGGTGATCTCAAGGTCTCCGATTTCGGCCTCAGCACTGTCTCCGATCAAATCAGACAAGACGGATTGTTTCATACTTTTTGTGGAACGCCTGCCTATGTTGCTCCTGAGGTTCTGGCAAGAAAAGGATACGACGGAGCCAAAGTTGATCTCTGGTCTTGTGGCGTTATTCTCTTCGTTTTAATGGCAGGTTATTTACCATTCCATGATCAGAACGTTATGGCTATGTACAAGAAGATTTACAGAGGAGTTTTCCGGTGTCCCAAGTGGTTCTCACCGGAGCTAAACTTATTATGTACTCGTCTTCTCGATACAAACCCAGAAACCAGAATCTCAATTCCAGATATCATGGAAAACAAGTGGTTCAAGAAAGGGTTCAAACAAATCAAGTTTTATTTCGACGACGATAAGCTCTGTACCAGCGTTGAAGATATTGACAAACTGGATTTAAACAAGGACGACATAGACTCAATCTCAGATTATTCAGTATCAGAATCCGATTCAGAACTAGAGGTCAAAAGAAGAAGCAACGCTTCATTGCCAAGACCAGCAAGCTTGAATGCATTTGATATAATATCATTCTCTGCAGGCTTCGATCTTTCTGGGTTGTTCGAGGAGAAAGGGGACGAGGCGAGGTTCGTGTCCGGCGCGCCAGTGTCAGAGATCATATCGAAGTTGGAGGAAATTGCGCAGTTGGTGAGCTTTACAGTGAGGAAGAAGGATTGCAGGGTGAGCTTGAAGGGATCAAGGGAAGGTGTGAAGGGGCCACTGACGATTGCTGCCGAGATATTCGAGCTTACTCCGTCGTTGGTGGTGGTGGAAGTGAAGAAGAAGGCAGGGGATAAAACAGAGTATGAACAGTTTTGTAACTCTGAATTGAAACCTGGCCTACAGAAGTTAATGATGAAGTATGAATCAGCAACTTCTTCTTCCAAGAGAAATTCTTCTGATGAGAGTCCTCACTCTGATTCTGATTCTTAG 1458 0.463 MADVDVSNNGLNRTKKKNNANLLLGRYEVGKLLGHGTFAKVYYARNIKTDEEVAIKIIDKEKILKGGLVAHIKREISILRRVRHPNIVQLFEVMATKTKIYFVMEYVRGGELFNKVAKGRLKEGVARKYFQQLISAVEFCHARGVYHRDLKPENLLLDENGDLKVSDFGLSTVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYDGAKVDLWSCGVILFVLMAGYLPFHDQNVMAMYKKIYRGVFRCPKWFSPELNLLCTRLLDTNPETRISIPDIMENKWFKKGFKQIKFYFDDDKLCTSVEDIDKLDLNKDDIDSISDYSVSESDSELEVKRRSNASLPRPASLNAFDIISFSAGFDLSGLFEEKGDEARFVSGAPVSEIISKLEEIAQLVSFTVRKKDCRVSLKGSREGVKGPLTIAAEIFELTPSLVVVEVKKKAGDKTEYEQFCNSELKPGLQKLMMKYESATSSSKRNSSDESPHSDSDS 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1236g00010 485 FunFam Non-specific serine/threonine protein kinase 18 106 - -
Pral1236g00010 485 SUPERFAMILY Protein kinase-like (PK-like) 23 312 IPR011009 -
Pral1236g00010 485 ProSiteProfiles Protein kinase domain profile. 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1236g00010 485 ProSitePatterns Protein kinases ATP-binding region signature. 33 56 IPR017441 GO:0005524
Pral1236g00010 485 Gene3D Transferase(Phosphotransferase) domain 1 17 338 - -
Pral1236g00010 485 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Pral1236g00010 485 ProSiteProfiles NAF domain profile. 340 364 IPR018451 GO:0007165
Pral1236g00010 485 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1236g00010 485 SMART serkin_6 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1236g00010 485 FunFam Non-specific serine/threonine protein kinase 342 460 - -
Pral1236g00010 485 CDD STKc_SnRK3 26 280 - -
Pral1236g00010 485 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 16 453 - -
Pral1236g00010 485 Pfam NAF domain 342 398 IPR004041 GO:0007165
Pral1236g00010 485 Gene3D Kinase associated domain 1, KA1 340 462 - -
Pral1236g00010 485 MobiDBLite consensus disorder prediction 463 485 - -
Pral1236g00010 485 FunFam Non-specific serine/threonine protein kinase 16 328 - -
Pral1236g00010 485 CDD CIPK_C 346 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1236g00010 Pral-Chr1236 340306 341849 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1236g00010 1 459 CBL-interacting serine-threonine protein kinases AT4G18700 78.867 0.0 744
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pral1236g00010 Pkinase 3.6e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1236g00010 - - gmx:100790133 761.525