Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1236g00009 ATGGATCCTACTTGTGGTTTGGTTGAGAAGGTTCGAGACTTCGTGCTCGACCTAATTTGGGAGCAGCTTCTTTATCTCATTCACTATCACAGAAACATTGAGGAGCTCAATGAACGACTTGTGGATCTCACACTTAAAAGGAACTCCATAGAGCATCAAGTAGATGTGGCTAAAAACAATGTAGAACAAATTGAAGAGGAAGTTCTTCGTTGGTTGCACAAAGTACATGAGATATCAGAGCAAGCACAACAGTTAACCAAAGAGAGTCAAGCAAAAACAGAGTGTAGTATAACTTCATGTCCCAACCCACGGCTACGCTCTAAGCTGAGCAAAAGAGCAGAGGCAGTGACCCAACAAGTTGTTGAAATTTGTAGAAACGGAAACTTTAACAGAGTTTCATATCGTGTTCCTCCCCAGTCTATGCTAGAGTTAACCAACACAGAAAGCAATGAAGGGATTGGTTCAAGAGTGCTGATTATGAATCAAATTATGGAGGCATTGCGGAATCCAAGTGTTAATATGATCGGATTGTGCGGGCCTGGTGGCGTTTGCAAGACCACTATAGCTAAAGAGGTAGCAAAGGAGGTAAAGAATCAAAACATATTTGAAAAGGTAATAATGGCAACTGTTTCTGAAGAACTGAACGTTGAGAAGATTCAAGACCAGATTGCTGAGAAGCTGGGTATGCAACTTAATGAAAAAACTGAAGACGTCAGAACTTCTAAGCTATCTGAGAGGCTGAACCAAGAGAACAATATGCTCCTAATATTGGATAATCTTTGGCAGGAACTTGATTTGGGCAAAGTAGGAATTCCCTTTGTTGATGTTGACAATTATAGCAAAAAGAATGAAGGTCGCAAAATTTTACTAACTTCAAGGAACAAAACGCTGTTGTCAGATCTCATGAAATGTCAAAAAATTATCGATGTAGGTGTTTTGTTAGAGGATGAAGCATGGGAGTTATTCAAGAGGATTGCTGAACTTTCTCTTGACTCAAGCAGTCCTGAGATGATATCTATAGCCACTGATATTGTTCGAAAGTGTGGTGGCCTGCCGCTTGCGATTGCTACAGCTGCCAAAGCGTTGAGGAAAAAAGGTCTTAATGAGTGGGAAAATGCTCGTGCTCGATTGAATAATCCTTTAGGGAGAAACATCACAGGGATTAAAGAGGTGGATCCCATTGTGAGGTTGAGCTACGATCGTCTAAGCTCAGAGAATAAAAATATTTTCTTGCTGACTGCCATGTTATCCCATGATCCCTCAATTGAAGACCTATTCATGCACTCTGTGGGGTTAGGCATTTTTCAAGGCATAGAGAACATGGAACAAGCCTATGTTGAAACCTCTGTTGCTGTAAGTAAGCTAAAATCATTAAACTTATTTCTTGATAGCATTTCTAGTCATCATGTTACAATCCATGACGTCTTTCAAGATATTGCATTATCGATTGCATCCGATCAATTACATGCATTGATTTTGAGGCATAAAAGCTTGAAAGAATGGCCAGATGAAGATGAGCTAGAAGGCTGCAAGGGAATTTGCTTGGAAGAAAGTGACATCAGTGTTGACCGTACAGAAGAGTTGCATGCTCCAACATTAGAATTCTTTCTACTGCACAACACAAAACAACATGACTTGACCATACCCAGCATGTTTTTCAAATCTTCAAAGAAGCTAAAACTGTTGGCATTTACTGATGTGCGTTTTTCATCACTACCATCACTCAGTTTCCTACTAAAACTAAACACATTGTGTCTGCACTCTTGTTTGCTAGAAGATATAACTGAAGTCACAAGGTTGAAGAATTTAAAAGTGTTAAGTCTTGCTTACTCTGAAATTGAATGGCTACCAATTCAATTAGCAGAGTTGACTTCTTTACAAATGTTGAATTTGTCCCATTGCTCCAAGCTCAAAGTGATTCCCCCAAAACTTCTATCTAGCTTGAAAAAATTGGAAGTGTTGTACATGGGAAACAGCTTTAACCAGTGGAAAATTGAAGGATCTAGTGAAGCTAATGAAAACGCAAGTCTTCAAGAGTTAAAGGATTTGCCAATCTCTTCTCTCGATATTCATATTCCTAATGTCTCTATGTTGCCGGAGGCTTTGTTCTTAGACTTGAATTTGAAGAGATATAGAATATTCATTGGAGAGCATTGGAAACGGCAAGACAATTGGAAATGGCAAGACAATTATGAAACTTCGAAGATATTGAAACTTGAGCTAGAGGGTAGTATCCATTTGAAGCGTGGGGTTCAGAAGTTGATGAAAGGAGCTGAAGATTTGTATTTATATGGATCTAATGGGCTTGAAAATGTTCTTCCCTGTCATGATGGAAGAGCATTTCCACATTTAAGGCATCTTCAGATTGAAAGTGATGATACTATTAGATACATTGTTTTGAACTCAGCGCAACATGAAGCTGCAACAAATAACATATCCAACAAAATGTCTGAGTTACTTTTCAACAAGGTGTTACTTCCAAAATTGGAGAGGTTGGAATTGTCCAATTCAATCAATTTGATTCCAATGGTGTGGGACGACCAACTTTCACACACCTCATTTAGCAATTTGAAAATATTGATTGTGAAAAACTGTGGCTTTGTGAAATTGGTGTCCCTTCGTGTGCTGAAATCTTTAAACAACTTGGAGGAACTAGAAGTTAGGGAGTGTAACATGTTGGAGTTGGTGTTTGATTTTGAAGATTTGAATGATTATAAAGGGGAGGCGGAGTTGTCATCAATGATTGTGCCGCTGAAAAAGTTAACGTTATGTGGATTGCAAAAATTGAAGAATGTATGGAGCAATCATTATGAAGGAGATGTCTCCTTCCCAAGTCTAAGGAGCGTGCGTGTGTCCGCTTGTAAAAGCCTCACAAGTTTGTTTCCTGCATCTATAGCCAAGGGCATGCTTCGTGATCTTGAATATCTTCAGATAGAAGATTGTGGTATAGAGGCAATTGTTGCAAAAGATCAAGTTTCAGAATCTGTTGCTACTGTGTTAGAGTTTTCTAGGCTGACTTCCCTTGAGCTTTCTTGGCTTCAAAATTTGAAGAGCTTCTATCCACAGAGACACACATTAGAATGGCCACAACTTCAACAGTTAGATGTTACATATTGTGATGAATTAGAGATATTTGAAAAGGAAGTCTCAAGTTCACTAGAAATACATGAGGAAGAGAGCACATTAGCCTCAAAATATCCTCTACTGTCCCATGACAAGGTCACTCATAATTTGGAGGAGTTGACATTACGGGGTAAAGGAGTTGAGATGATAGGGAGTGGCCAGCTTTCAACGTACCGCTTCCCCAAAGTAAAGCTGCTTAGTCTAGATGTTGGTTATGATGAAGCAACGACTATTTCATACAAATTGTTGTTGAAAAGCTTTCCAAATTTAGAGGAGCTGACACTGCGGGGTCAAATTAAAAAGGCTTCTGGGGGGGATGATGTTCCTCTTCCAATAAAATTGACTCGACAGTATTTACAGTATCACAAGCTTGGTGCCACTCTTAGTTTCTTCACCAAATCTCACACATCTGCACGTGGAATGGAAGGAGAGGATGATGACGATGAGGAAGTCGTTTTCAGCAAGTTGCAGCATTTGAAAGTTGAACGGTTACCAGAATTGAAGAGATTTTGCCGCTACAATTACACTTTCAGATTTCCGTTATTGGATCAGCTGATCATAACGGAATGTCCAAGATTCAAAGTATTCTCTCCAGGACTCATTGATACACCATCTCTTAAAAGCATTCAAGTGTCACAAAAAATGGGGGAGAAACATCATGAAATATGGGACACCAGTCTTAACAAAACATTCGACCAACAGATATTTGTGGCATTAAGAGAGATGGTGTTAGATGAGGATGATGTTAGCATGATAAGGAATGACCAATTTCCAGCGGATTGTTTTGCTCAAATGGAAATTCTGGGCATAGTAGGATTTAATGATGAAGGGGCAGCATTTCCGCATACATTGCTTGAAAGATTTCCGCGGCTGACTGAACTTCGTGTGAAGGATAGTTCTTTCGAGGAGATATTCCCATCACCTGTTGTTCATCAAATTCAACAACTTCATAATTTGACAGTGTTGAAGGTGTTCCAATGTCATCAACTCATCTATTTAATGACAAATTCAGCCGCCAAAAGTTTGGTGAATCTTGAAACGTTGGAAATAGATGATTGCAAAAAGATGGAGAAAATTGTAAAGAATGAGAATAATGACGATGTGGAAGGTGGAATCACGTTCAGTGCGTTAAGAAGATTAAAACGCAGTAGTCTACCAAGACTGAAAGCGGAAGAGCATAAAACGGATTTCAACATTGAAGACCCAGCAACAAATAATCATAAGGTGTCATTCCCAGAGTTAGAGATATTAGAGTTATCCTATTTAAACAGTTTGATTCCACGGATATGGGATGACAAACTTCCACACCACTCATTGAGCAACTTGAAAACATTGACTGTGAGCTGTTGTGGCTTTGTGAAATTGGTGCCACTTCATGTGCTGAAATCTTTAAACAACTTACAAGAACTGGAAGTCAGGGGCTGCAACATGTTAGAGACGGTGTTTGATTTTGAAGATTTAAATGATTATAAAGAGATGGTGTCATCATCAGTGATCGTGCCATTGAAAAAGTTAAGGCTATGGTATTTGCCAAAATTGAAGAATGTATTGGGCAATAATGACCGCCAAGGAGAAATAAACTTAGTTTCTTCACTAGATGGTTCATGCCATCAAATAGAAGAACTTATAACGAAACAGAAAAAAGAGGACAATGAGGACAAGAAAATCATTTTCAGCAAACTGGAGTTTTTGGAACTTGATGAATTACCAAGGTTGAAGAGATTTTGCAGCCAAAATTATACTTTCCAGTTTCCATTATTACAACATGCAATCGTATCAGAGTGCCCTCAACTCACAATATTCTGTTCTGGAGCCATTCATGCTCGCTACTTCAAAAGGTTCAAGCGACGACTCCATATGGACCTCACATAG 4995 0.39 MDPTCGLVEKVRDFVLDLIWEQLLYLIHYHRNIEELNERLVDLTLKRNSIEHQVDVAKNNVEQIEEEVLRWLHKVHEISEQAQQLTKESQAKTECSITSCPNPRLRSKLSKRAEAVTQQVVEICRNGNFNRVSYRVPPQSMLELTNTESNEGIGSRVLIMNQIMEALRNPSVNMIGLCGPGGVCKTTIAKEVAKEVKNQNIFEKVIMATVSEELNVEKIQDQIAEKLGMQLNEKTEDVRTSKLSERLNQENNMLLILDNLWQELDLGKVGIPFVDVDNYSKKNEGRKILLTSRNKTLLSDLMKCQKIIDVGVLLEDEAWELFKRIAELSLDSSSPEMISIATDIVRKCGGLPLAIATAAKALRKKGLNEWENARARLNNPLGRNITGIKEVDPIVRLSYDRLSSENKNIFLLTAMLSHDPSIEDLFMHSVGLGIFQGIENMEQAYVETSVAVSKLKSLNLFLDSISSHHVTIHDVFQDIALSIASDQLHALILRHKSLKEWPDEDELEGCKGICLEESDISVDRTEELHAPTLEFFLLHNTKQHDLTIPSMFFKSSKKLKLLAFTDVRFSSLPSLSFLLKLNTLCLHSCLLEDITEVTRLKNLKVLSLAYSEIEWLPIQLAELTSLQMLNLSHCSKLKVIPPKLLSSLKKLEVLYMGNSFNQWKIEGSSEANENASLQELKDLPISSLDIHIPNVSMLPEALFLDLNLKRYRIFIGEHWKRQDNWKWQDNYETSKILKLELEGSIHLKRGVQKLMKGAEDLYLYGSNGLENVLPCHDGRAFPHLRHLQIESDDTIRYIVLNSAQHEAATNNISNKMSELLFNKVLLPKLERLELSNSINLIPMVWDDQLSHTSFSNLKILIVKNCGFVKLVSLRVLKSLNNLEELEVRECNMLELVFDFEDLNDYKGEAELSSMIVPLKKLTLCGLQKLKNVWSNHYEGDVSFPSLRSVRVSACKSLTSLFPASIAKGMLRDLEYLQIEDCGIEAIVAKDQVSESVATVLEFSRLTSLELSWLQNLKSFYPQRHTLEWPQLQQLDVTYCDELEIFEKEVSSSLEIHEEESTLASKYPLLSHDKVTHNLEELTLRGKGVEMIGSGQLSTYRFPKVKLLSLDVGYDEATTISYKLLLKSFPNLEELTLRGQIKKASGGDDVPLPIKLTRQYLQYHKLGATLSFFTKSHTSARGMEGEDDDDEEVVFSKLQHLKVERLPELKRFCRYNYTFRFPLLDQLIITECPRFKVFSPGLIDTPSLKSIQVSQKMGEKHHEIWDTSLNKTFDQQIFVALREMVLDEDDVSMIRNDQFPADCFAQMEILGIVGFNDEGAAFPHTLLERFPRLTELRVKDSSFEEIFPSPVVHQIQQLHNLTVLKVFQCHQLIYLMTNSAAKSLVNLETLEIDDCKKMEKIVKNENNDDVEGGITFSALRRLKRSSLPRLKAEEHKTDFNIEDPATNNHKVSFPELEILELSYLNSLIPRIWDDKLPHHSLSNLKTLTVSCCGFVKLVPLHVLKSLNNLQELEVRGCNMLETVFDFEDLNDYKEMVSSSVIVPLKKLRLWYLPKLKNVLGNNDRQGEINLVSSLDGSCHQIEELITKQKKEDNEDKKIIFSKLEFLELDELPRLKRFCSQNYTFQFPLLQHAIVSECPQLTIFCSGAIHARYFKRFKRRLHMDLT 1664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1236g00009 1664 Gene3D - 312 403 IPR042197 -
Pral1236g00009 1664 Coils Coil 26 74 - -
Pral1236g00009 1664 SUPERFAMILY RNI-like 1077 1400 - -
Pral1236g00009 1664 Gene3D Ribonuclease Inhibitor 1190 1418 IPR032675 -
Pral1236g00009 1664 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 411 IPR027417 -
Pral1236g00009 1664 PRINTS Disease resistance protein signature 348 362 - -
Pral1236g00009 1664 PRINTS Disease resistance protein signature 621 637 - -
Pral1236g00009 1664 PRINTS Disease resistance protein signature 174 189 - -
Pral1236g00009 1664 PRINTS Disease resistance protein signature 247 261 - -
Pral1236g00009 1664 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 918 1046 - -
Pral1236g00009 1664 Pfam NB-ARC domain 160 400 IPR002182 GO:0043531
Pral1236g00009 1664 SUPERFAMILY RNI-like 1451 1640 - -
Pral1236g00009 1664 SUPERFAMILY L domain-like 472 1530 - -
Pral1236g00009 1664 Gene3D Ribonuclease Inhibitor 907 1149 IPR032675 -
Pral1236g00009 1664 Gene3D Ribonuclease Inhibitor 526 906 IPR032675 -
Pral1236g00009 1664 Gene3D Ribonuclease Inhibitor 1419 1648 IPR032675 -
Pral1236g00009 1664 Gene3D - 139 311 IPR027417 -
Pral1236g00009 1664 SUPERFAMILY RNI-like 760 1040 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1236g00009 Pral-Chr1236 292882 302681 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1236g00009 152 641 WRKY Transcription Factor Family AT5G45050 23.315 2.44e-09 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1236g00009 - - pcin:129285257 1006.13