Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1236g00006 ATGGATATCACTTGCGGAACATTGAGTGGTTTGGTTGAGAAGCTTCGGGATCTAGTGATCGACCTAACTTGGGAGCAGCTTCGTTATCTGTTTCAGTATCACAGAAACATTGAGGAGCTCAATGAACGACTTGAGGAACTCACCCTTGAAAGAAGCTCCAAACAACACCAAATAGATAATGCTAGAAACAATTTAGAACAAATTGAAAAGAAAGTTGAGCATTGGTTGCGCACAGCAGATGAGATTTTAGAGCAAACACAAATGTTTCATGAAGAAGAGAGTCAAGCAAAAACAGATTGTAGCGTGACTTCCTGTCCCAACCTGTGGCTACGTTATAAACTAAGCAAAAGAGCAAAGGCAATGGCACAAGAAGTTGTTGAAATCTATGGGAAGAGAAACTTTGATAGGGTTTCATATCCTGTTCCTCCCCGATCGATGCCAGAATTACTCAACAAAGAAAGCAGTGAAGGGGTTGGTTCAAGAACGCAAATTGTGAATCAAATTATGGAGCACTTACATAATCCTAGTGTTAATATTGTCGGATTGTGTGGACATGGTGGTGTTGGCAAGACCACTATAGCTGAAGAAGTAGCAATGAAGGCGAAGAATCAAAACATGTTTAAAAGGGTGATCATGGCAACTATTTCTAGTGAATTGAATGTTGTGAAGATTCAAGCCTGGATTGCAGGGATGCTGGGTATGCAACTCAATGACGAATCTGAAGAAGCAAGAGCTTGTCGTCTGTGTGAGAGGTTGCAGCAAGAGGAGAATCTGCTTCTAATCTTGGATGATCTTTGGAAGCAAAATGATTTGGTCAAAGTTGGGATTCCCATTGTTGGTGTTGGAAATGACAGCAAAAAGAATGAAGGCCGCAAAATTTTACTAACTTCAAGGGACAGAATGCTGCTGTTAAATCACATGAAATGCAAAGATATTATCGAAGTGGGTGTTTTGTCAGAGAATGAAGCATTAGAGTTGTTCAAGAGGATTTCTGAACTTCCTATTGACTCAAGCACTTCTGACAACTTGATATCTGTAGCCTATGAGATTGTTCGAAAGTGTCATGGCTTGACATTAGCGATTGTAGCGGCTGCCAACGCATTAAGGGGAAAAAATCTAGATGAGTGGCAAGATTTCTGTAAACGATTGAATCATCCTTTAAGAAGAAACATCACAGGAATTAAAGAGGTGGATGAGATATTGAAGTCGAGTTATGATTGTCTAAGCTCAGAGAAAAAACGCATTTTCTTGCTCTCCGCCATGCTCTCCCATGATCCCTCAATTGAGGACCTGCTCATGTACTCTATGGGGTTAGATATTCTTGACGGCATAGAAAACATAGAAGATGGCCACATTGGAGTCTCTGCTGCCGTAAGTAAGCTAAAATCATTAAACTTATTTCTTGATAGTTTTTCTAGTCATTACTTTACAATACATGACGTCTTTCGAGATGTTGTATTGTCGATCACACCCAATGAATTAAAAGCATTCATTGTGAGGCATAGAAGCTTGAAAGAATGGCCTGGCAAAAATAAGCTTGAAGACTACAAGGGAATTTGCTTACAAAAGAGTGACATCAGTGACCTTCCAGAAGAGCTGCATGGTCCGAGATTAGAATTCTTTTTGCTAGACAGCACAGAACGTGATTTGGCCATACCTATGATGTTTTTCAAATCATCAAAGGAGCTGAAAGTGTTGGCATTTACCAATGTGCATTTTTCGTCACTACCATCGCTCATGTTCCTGCAAAAACTAAAAACATTGTGTCTCCACTCTTGTTTGCTGGAAGACATAATTGAGGTTAGAAGCTTGAAGAAGTTAAAAGTCCTAAGTCTTGCTTACTCTGAAATTCAACAACTGCCTATTGAATTGGCAGACTTAACCTCTTTAGAAATGTTGAATTTAGCCCACTGCTCCAAGCTCAAAGTGATTCCACCAAAACTGCTATCTAGCTTCAAAAAATTGGGGGTTTTGCTTATGGGAAATAGCTTTGACCAGTGGAAAGTTGAAGGATCTACTGAAGCTAATGAAAATGCAAGTCTTGACGAGTTGAAGGGCTTGCCAATCTGTTCTCTAGATATTCATATTCCTAATGTCTCTATGTTGCCAGAGACTTTGTTCTTAGATATGAATTTGAAGAGATACAAAATACTCATTGGGAAGCACTGGGAATGGGGGACGGTCGGCTATAAAACTTCAAAGGTATTGAAACTTGAGCTTGAGAGTGATATCCATTTGAAGCCTGGGATCATTTCCGCATTTAAGGCATCTTCGGATTGGAAGTAA 2286 0.3981 MDITCGTLSGLVEKLRDLVIDLTWEQLRYLFQYHRNIEELNERLEELTLERSSKQHQIDNARNNLEQIEKKVEHWLRTADEILEQTQMFHEEESQAKTDCSVTSCPNLWLRYKLSKRAKAMAQEVVEIYGKRNFDRVSYPVPPRSMPELLNKESSEGVGSRTQIVNQIMEHLHNPSVNIVGLCGHGGVGKTTIAEEVAMKAKNQNMFKRVIMATISSELNVVKIQAWIAGMLGMQLNDESEEARACRLCERLQQEENLLLILDDLWKQNDLVKVGIPIVGVGNDSKKNEGRKILLTSRDRMLLLNHMKCKDIIEVGVLSENEALELFKRISELPIDSSTSDNLISVAYEIVRKCHGLTLAIVAAANALRGKNLDEWQDFCKRLNHPLRRNITGIKEVDEILKSSYDCLSSEKKRIFLLSAMLSHDPSIEDLLMYSMGLDILDGIENIEDGHIGVSAAVSKLKSLNLFLDSFSSHYFTIHDVFRDVVLSITPNELKAFIVRHRSLKEWPGKNKLEDYKGICLQKSDISDLPEELHGPRLEFFLLDSTERDLAIPMMFFKSSKELKVLAFTNVHFSSLPSLMFLQKLKTLCLHSCLLEDIIEVRSLKKLKVLSLAYSEIQQLPIELADLTSLEMLNLAHCSKLKVIPPKLLSSFKKLGVLLMGNSFDQWKVEGSTEANENASLDELKGLPICSLDIHIPNVSMLPETLFLDMNLKRYKILIGKHWEWGTVGYKTSKVLKLELESDIHLKPGIISAFKASSDWK 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1236g00006 761 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 28 754 - -
Pral1236g00006 761 Gene3D Ribonuclease Inhibitor 476 717 IPR032675 -
Pral1236g00006 761 Gene3D - 317 409 IPR042197 -
Pral1236g00006 761 Coils Coil 30 85 - -
Pral1236g00006 761 PRINTS Disease resistance protein signature 354 368 - -
Pral1236g00006 761 PRINTS Disease resistance protein signature 252 266 - -
Pral1236g00006 761 PRINTS Disease resistance protein signature 179 194 - -
Pral1236g00006 761 PRINTS Disease resistance protein signature 625 641 - -
Pral1236g00006 761 SMART AAA_5 176 308 IPR003593 GO:0016887
Pral1236g00006 761 SUPERFAMILY L domain-like 458 677 - -
Pral1236g00006 761 Gene3D - 146 316 IPR027417 -
Pral1236g00006 761 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 417 IPR027417 -
Pral1236g00006 761 Pfam NB-ARC domain 162 406 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1236g00006 Pral-Chr1236 185163 187534 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1236g00006 177 645 WRKY Transcription Factor Family AT5G45050 23.269 6.18e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1236g00006 - - pcin:129285257 818.15