Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1236g00002 ATGGATATTACTTGTGGAACATTGAGCAGTTTTGTTGACAAGTTCTGGGACCTAGTGCTGGACTTAACTTGCAAGCAGTTTCATCATTTGTTTCGCTATCACAAAAATATTAAGCAGCTCAATGAACGACTTGTGGAACTCATCGATGAAAGAAGCTCCATACAACACCAAATACATGAGGCTAAAAACAATGCAGAACCAATTGAAGACAAAGTTCTTCATTGGCTGAGCAGAGTAGATAAGATTTCAGAGCAAATTCAAAAGTTTCATGATGAAGAGTCTCAAGCAAAAACAGAGTGTAGCGTAACTTCATGTCCCAACCCGTGGCTACGCTATAAACTAAGCAAAAGAGCAAAGGCAATGGCGCAAGAAGTTGTTGAAGTTTGTGGAAAGAGAAACTTCAATACAGTTTCATATCGCGTTCCTCCACAGTCCATGCCGGAATTATTCAACAGAGCAAGCAATGCAGGGATTGGTTCAAGAGTGCAAATTGTGAATCAAATTATAGAGGAATTACGGAATCCATGTGTTAATATGATTGGATTGTGTGGGCTTGGTGGTGTTGGCAAGACCACTATAGCTAAAGAGGTAGCAAAAAGTCAAAACATGTTTGAAAAGGTGATCTTGGCAATTGTTTCTCAAGAATTGAATGTTGAGAAGATTCAAGGCCAGATCGCTGTGAAGTTGGGTATGCAACTCAATGAAACATTTGAAGAAGTAAGAGCTTGTCGTCTGTGTGAGAGGTTGAAGCAAGAGAAGAATATGCTCCTAATATTGGATGATCTTTGGGAGCAACTTGATTTGGGCAAAGTTGGAATTCCTTTTTTTGATGTTGAGAATTATAACAAAAAAAATGAAGGATGCAAAATTTTACTAACTTCTAGGAACGAAACGCTGCTGTCAAACCGCATGAAATGTGAAAAAACTATCAGAGTAGGTTTTTTGTCAGAGGATGAAGCATGGGAGTTGTTCAAGAGGACTGCTGAATTGTCTGTTGACTCAAGTAGTCCTAACCTGTTATCTATAGCCAATGCAATTGTTCAAAAGTGTGGAGGCTTGCCGCTAGCAATTGCTACAGCTGCCAAAGAATTGCTAGGAAAAAATCTGAATGATTGGAAAGATTACCTTGCCCGATTGAATAATCCCTTAAGGAGAAACATCACAGGAATTAGAGAGGTAGATACCATTTTGATATCGAGCTACGATTGTCTAAGCTCATCAGAGAGCAAGCATATTTTCTTACTTGGTGCCATGTTGTCCCATGATCCTTCAATTGAAGACCTTCTTATGCACTCTATGGGGTTGGATTTTTTGAAACACACAGAAAACATGGAAGAAGCCCACAACGGAATCTCTGCTATTGTAAGTAAGCTAAAATCATCAAACTTATTTCTTGATAGCCTTTCTAGTCATCGTTTTACAATACATGACGTCTTTCGAGATATTGCATTGTCGATTGCATCCGATGAATTACATGCATTCATTATGAGGCACAGAAAGTTGACAGAATGGCCAGACAAAAATATGCAAGAGGGCTATAAAGGAATTTGCTTACGACCGAGTGAAATTAGTGACCTTCCAGAAGAGTTGTATTGTCCGAGATTAGAATTCTTTCTACTTGATAGCACAAACAGTGATTTGACCATACCCAGCATGTTTTTCAAATATTCAAAGGAGCTGAAACTGTTGGCATTTAGCAATGTGCATTTTTCATCACTCCCATCGCTTAGTTTTCTAATAAAACTAAAAACATTGTGTCTACACTCGTGTTTGTTAGAAAATATAACTGAGGTTAGAAGCTTGAAGAATGTAAAAGTCCTAAGTTTTGCTTACTCTGAAATTGAATCGCTACCAGTTCAATTAGCAGAGTTGACTTCTTTACAAATGTTGAATTTGGCCCATTGCTCTAAGCTCAAAGTGATTCCCCCGAAACTTCTATGTAACCTGAAAAAATTGGAAGTGTTGCACATGGGAAACAGCTTTAACCAATGGAAAATTGAAGGATCTAGTGAAGCTAATGAAAATGCAAGTCTTGATGAGTTAAAGGATTTGCCCATCTCTTCTCTCGATGTTCATATTCCTAATGTCTCTATGTTGCCAGAGACTTTGTTCTTAGATTTGAATTTGAAGAGATACAAAATACTCATTGGGAAGCACTGGGAATGGTGGACAGTCTGCTATAAAACTTCAAAGGTATTGAAACTTGAGCTTGAGAGTAATATCCATTTGAAGCCTGGGGTCCGAAAGTTGATGAAAGGAGCTGAAGATTTGTGTTTATATGGATCTAATGGGCTTGAAAATTTTCTACACGGTCATGATGGAAGATCATTTCCGCATTTAAGGCATCTTCAGAGTGAAAGTAACAATACTATGGGATCCATTGTTTTGAACTCAGCACATCATGAAGCGGCAATAAATAACAAATCCAATAAAATGTCCGAGTCACTTTTGAACAAGGTGCTGCTTCCAAAATCAGAGATATTGCGATTATCTAATTCAATCGGTTTGATTCCATTGATATGGGATGACCAACTTTCACACAACTCATTTAGGAACTTGAAAATATTGTTTGTGGAACATTGTGGCCTTGTGAAATTGGTGCCCCTCCGTGTGCTGAAATCTTTAAATAGCTTGGAAGAACTAGAAGTTAGAGCGTGTGACATGTTGGAGATTGTGTTCGATTTTGAAGATTTCAATAATTATAAAGGGGCAGCGGAGTCATCATCAGTGATTGTGCCACTGAAAAAGTTAACGCTATATAGATTGCAAAAATTAAAGAATGTGTGGAGCAATCACTATGAAGGAGATGTCTCCTTTCCAAGTCTAAGGAGCATGCATGTTTCCTATTGTGAAAGCCTCACTAGTCTGTTTCCTACATTTATAGCCAAAGGCATGCTTCGTGATCTTGAAGAGCTTCGAATATCTAATTGTGGTATAGATGTGATTGTTGCGAAGGATCAAGTTTCAAAATCTGTTGCTCCTCTGTTAGAGTTTCCTAGGCTTACTTTCCTTGAGCTTTCTATGCTTGGAAATTTGAGGAATTTCTATCCACGGAGACACACATTAGAATGGCCACGCCTTCAACAGTTATCTGTTACATATTGTGATGAATTAGAGATATTTGAAAAGGAAGTCTCAAGTTCAGTAGAAATACATGAGGAAGAGAGCACATCAGACTTAAAATATCCTCTACTATACCATGACAAGGTCACTCATAATTTGGAGAAGTTGACATTGTGGGGTAAAGGAGCTCAGATGATACGGAGTGGCCAGCTTTCAATGTACCACTTCCCCAAAGTAAAACTGCTGCATCTACATGTTGGTCAGAAAGCAACGACTATTTCATACAAATTGTTGTTGAAGAGCTTCCCAAATTTAGCGGAGCTGACACTGGGGGGTGACATTATGAAGGCTTCTGGAGGGGATGATGTTCCTCTTCCAATAAAATTGACTCTCGATGATATTGACGTTATCACAAGCTTGGTACCACTCTTAGTTTCTTCACCAAATCTCACACATCTGCACGTGAAACGTTGTTATCATTTGACCACTCTGATGACGTCATCAGTTGCTCAAAGCTTGGTCCATCTCACAAGTCTCTCAATTAGAAGGTGCTCTAACATAGTGGAAATTATATGGAAGCAGGAAGGAGAGGATGATGACGATGAGGAAGTTGTTTTCGGCAAGTTGAAGTATTTGAAACTTGAACGCCTACCAAGATTGAAGAAATTTTGCGGCTACAATTATACTTTCAGGTTTCCGTTATTGGATCAGCTGATCATAACAGAATGTCCAAAATTCAAAGTATTCTCTCCAGGACTCATTGATACACCATCTCTTCAGAGCGTTCTACTGTCACAAAAACTGGGGGAAAAACATCATGAAATTTGGGACACCAATCTTAACAAAACATTATTCCGACAGATATTTGTGGCATCAAGAGAGATGGTGTTAGATGAGTATGATGTTAGCATGATAAGGAATGACCAATTTCCAGCAGACTGTTTTGCTCAAATGGAAATTCTGGGCATACAAGGATTTGATGAAGAAGGGGTAACATTTCCGTATACATTGCTTGAAAGATTTCCGCAACTGAATGAACTTCATGTGAAGGATAGTTCCTTTGAGGAGATATTCCCATCACACATTGTTCATCAAATTCCACAACTTCATAATTTGACGGTGCTAAAGGTGTCCAAATGTCATCGGCTCATCTATTTAATGACAAATTCAGCTGCTAAAAGTTTGGTGAATCTTGAAACACTGGACATATATGATTGCGAAAAGATGGAGAAAATTGTAAAGAATGAGAATAATGAAGATATAGAAGGTGGAATCACGTTCAGTACGTTGAGAGTATTAAAACTCAGTCGTCTACCAAGATTGAAAGCAGAAGAGCATAAAACGGATTTCAACACTGAAGGCCCAGCAACAAGTAATCATAAGGTGTCATTCCCAAAGTTAGAGATATTACAATTATACCTTTTGAACAGTTTGATTCCACCGATATGGGATGACAAACTTTCACACAACTCTCTAAGCAACTTGAAAACTATTACTGTGTGGAGGTGTGGCTTTGTGAAATTGGTGCCCCTTCATGTGCTGAAATATTTAAGCAACTGGGAAGAACTGGAAGTTGAGGGATGTCGCATGTTGGAGACGGTATTTGATTTTGAAGATTTGAATGATTATAAAGAGATTGTGTCATCATCAGTGATTGTGCCATTGAAAAAGTTAAGGCTAAAGCGTTTGCCAAAATTGAAGAATGTGCTGAGCAATAATGACCGCCAAGAAGAAATAAACTTGGTACCACCCTTAGTATTTTCACCAGATGGTTCATGCCATCAAATAGAAGAATATATGAAACAGAAAAAAGAGGACAATGAGGACAAGAAAATCATTTTCAGCAAACTGGAGTTTTTGGAACTTGATGAATTACCAAGATTGAAGAGATTTTGCAGCCAAAAGTATACTTTCAAGTTTCCATTATTGCGATGTGTAACCATATCAGAGTGCCCTCAACTCATGATGTTCTGTTCTGGAGCCATTCATGCCCCGCAGCTTCAAAAGGTTCGAGTGACGAGAATATGTGAATCTGACAGAGATATTTGGATGACTGATCTTAATGCTACCATCCAACATCGGTTTACTATTCAAGAGGTAATTTTCACAACCAAAAGCATAGCTTTAAATGCAGAGAATATCACAATGATAAGGGATGTCTTTCCTAAAGTGAGAGCTCTTTATGTAGAAAGCTTCGCAGATAAAGGGGTAATATTTCCCTATAGCTTTCTTAAGAGATTTCCCAAGTTGGATGAGCTTTATGTGGAGCACAGTTCATTTGAGGAGATATTCCCCTCACAGGATGAGATTCTTGATTTTATGGGGAAAATCCCACCATTTGAGAAATTACACATTGCCTATTTGGATCAACTCAAGAGCATTTGGAAGGATGACTCTCAACTACCACCAATTCATCAAGACCTAATAACATGCCTGGAAGTCGAAAGTTGTCATAGCTTGATCAAGTTGGCACCATCCTCTGCTTCATTTCAAAATTTGCAGGATCTGTCTATATCTGGATGTCATCAACTCATCTATTTGATGACAAGTTCAACTGCCAAAAGTTTGGTGAGTCTTGAATGGTTGGCGGTAAATGATTGTAAAAAGATGGAGGAAATTGTATTGAATGAGAACAACAAAGATGTAGAAGGTGGAATCACATTCAACCGACTGTGGTGGCTCGAACTTATTGATATGCCAAGCTTGAAGATGTTTTCTTCACAAAGTCAGGCAATTGAAATCCCAAGATTAAGTATGATAGAAATAACTCGATGTCCTGAAATAAAGATGTTTTGTTTAGGACTGTTAGAAACACCAGAGTTGTCTAGAGTAAAAATAGAACAGCATGAGATGGAATGGAAGGACAAAGGAGACCTCAACAAAACAATAGAAATGCTATCCTCGACGAAGGTATGA 5979 0.3833 MDITCGTLSSFVDKFWDLVLDLTCKQFHHLFRYHKNIKQLNERLVELIDERSSIQHQIHEAKNNAEPIEDKVLHWLSRVDKISEQIQKFHDEESQAKTECSVTSCPNPWLRYKLSKRAKAMAQEVVEVCGKRNFNTVSYRVPPQSMPELFNRASNAGIGSRVQIVNQIIEELRNPCVNMIGLCGLGGVGKTTIAKEVAKSQNMFEKVILAIVSQELNVEKIQGQIAVKLGMQLNETFEEVRACRLCERLKQEKNMLLILDDLWEQLDLGKVGIPFFDVENYNKKNEGCKILLTSRNETLLSNRMKCEKTIRVGFLSEDEAWELFKRTAELSVDSSSPNLLSIANAIVQKCGGLPLAIATAAKELLGKNLNDWKDYLARLNNPLRRNITGIREVDTILISSYDCLSSSESKHIFLLGAMLSHDPSIEDLLMHSMGLDFLKHTENMEEAHNGISAIVSKLKSSNLFLDSLSSHRFTIHDVFRDIALSIASDELHAFIMRHRKLTEWPDKNMQEGYKGICLRPSEISDLPEELYCPRLEFFLLDSTNSDLTIPSMFFKYSKELKLLAFSNVHFSSLPSLSFLIKLKTLCLHSCLLENITEVRSLKNVKVLSFAYSEIESLPVQLAELTSLQMLNLAHCSKLKVIPPKLLCNLKKLEVLHMGNSFNQWKIEGSSEANENASLDELKDLPISSLDVHIPNVSMLPETLFLDLNLKRYKILIGKHWEWWTVCYKTSKVLKLELESNIHLKPGVRKLMKGAEDLCLYGSNGLENFLHGHDGRSFPHLRHLQSESNNTMGSIVLNSAHHEAAINNKSNKMSESLLNKVLLPKSEILRLSNSIGLIPLIWDDQLSHNSFRNLKILFVEHCGLVKLVPLRVLKSLNSLEELEVRACDMLEIVFDFEDFNNYKGAAESSSVIVPLKKLTLYRLQKLKNVWSNHYEGDVSFPSLRSMHVSYCESLTSLFPTFIAKGMLRDLEELRISNCGIDVIVAKDQVSKSVAPLLEFPRLTFLELSMLGNLRNFYPRRHTLEWPRLQQLSVTYCDELEIFEKEVSSSVEIHEEESTSDLKYPLLYHDKVTHNLEKLTLWGKGAQMIRSGQLSMYHFPKVKLLHLHVGQKATTISYKLLLKSFPNLAELTLGGDIMKASGGDDVPLPIKLTLDDIDVITSLVPLLVSSPNLTHLHVKRCYHLTTLMTSSVAQSLVHLTSLSIRRCSNIVEIIWKQEGEDDDDEEVVFGKLKYLKLERLPRLKKFCGYNYTFRFPLLDQLIITECPKFKVFSPGLIDTPSLQSVLLSQKLGEKHHEIWDTNLNKTLFRQIFVASREMVLDEYDVSMIRNDQFPADCFAQMEILGIQGFDEEGVTFPYTLLERFPQLNELHVKDSSFEEIFPSHIVHQIPQLHNLTVLKVSKCHRLIYLMTNSAAKSLVNLETLDIYDCEKMEKIVKNENNEDIEGGITFSTLRVLKLSRLPRLKAEEHKTDFNTEGPATSNHKVSFPKLEILQLYLLNSLIPPIWDDKLSHNSLSNLKTITVWRCGFVKLVPLHVLKYLSNWEELEVEGCRMLETVFDFEDLNDYKEIVSSSVIVPLKKLRLKRLPKLKNVLSNNDRQEEINLVPPLVFSPDGSCHQIEEYMKQKKEDNEDKKIIFSKLEFLELDELPRLKRFCSQKYTFKFPLLRCVTISECPQLMMFCSGAIHAPQLQKVRVTRICESDRDIWMTDLNATIQHRFTIQEVIFTTKSIALNAENITMIRDVFPKVRALYVESFADKGVIFPYSFLKRFPKLDELYVEHSSFEEIFPSQDEILDFMGKIPPFEKLHIAYLDQLKSIWKDDSQLPPIHQDLITCLEVESCHSLIKLAPSSASFQNLQDLSISGCHQLIYLMTSSTAKSLVSLEWLAVNDCKKMEEIVLNENNKDVEGGITFNRLWWLELIDMPSLKMFSSQSQAIEIPRLSMIEITRCPEIKMFCLGLLETPELSRVKIEQHEMEWKDKGDLNKTIEMLSSTKV 1992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1236g00002 1992 SUPERFAMILY L domain-like 475 1041 - -
Pral1236g00002 1992 Gene3D Ribonuclease Inhibitor 1070 1305 IPR032675 -
Pral1236g00002 1992 Gene3D Ribonuclease Inhibitor 1326 1470 IPR032675 -
Pral1236g00002 1992 Gene3D Ribonuclease Inhibitor 934 1063 IPR032675 -
Pral1236g00002 1992 PRINTS Disease resistance protein signature 350 364 - -
Pral1236g00002 1992 PRINTS Disease resistance protein signature 179 194 - -
Pral1236g00002 1992 PRINTS Disease resistance protein signature 622 638 - -
Pral1236g00002 1992 PRINTS Disease resistance protein signature 249 263 - -
Pral1236g00002 1992 Pfam NB-ARC domain 163 402 IPR002182 GO:0043531
Pral1236g00002 1992 Gene3D - 314 404 IPR042197 -
Pral1236g00002 1992 SUPERFAMILY RNI-like 1484 1896 - -
Pral1236g00002 1992 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1069 1281 - -
Pral1236g00002 1992 Coils Coil 30 64 - -
Pral1236g00002 1992 SUPERFAMILY RNI-like 1150 1555 - -
Pral1236g00002 1992 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 414 IPR027417 -
Pral1236g00002 1992 Gene3D Ribonuclease Inhibitor 1484 1900 IPR032675 -
Pral1236g00002 1992 Gene3D Ribonuclease Inhibitor 485 902 IPR032675 -
Pral1236g00002 1992 SMART AAA_5 176 445 IPR003593 GO:0016887
Pral1236g00002 1992 Gene3D - 140 312 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1236g00002 Pral-Chr1236 25621 35503 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1236g00002 177 642 WRKY Transcription Factor Family AT5G45050 23.704 5.37e-10 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1236g00002 - - pcin:129285257 1069.3