Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1233g00010 ATGGAGGATAACCTGGGAGGAAGTTCCTCATCATCAATCAATGTTGTTGACAGAAGTAGTAATGGTGGGATTGTGAAAGAACAAGACAGGTTGTTGCCAATAGCTAATGTTGGTCGGATTATGAAGCAAATTTTGCCGCAGAACGCCAAGATCTCGAAGGAAGCGAAGGAGACGATGCAGGAATGTGCGTCGGAGTTCATAAGCTTCGTCACCGGCGAGGCATCTGATAAGTGCAGAAAAGAGAGGAGGAAGACCGTTAATGGCGATGATATATGTTGGGCCCTGAAAACCCTAGGGTTTGATGATTACGCAGAGCCACTTAAAAGCTACTTGCATAGATATAGAGAGCTTGAGGTAGATCAACGAGCCAATAATTCTAATCATCATCATCATCATTAA 399 0.4386 MEDNLGGSSSSSINVVDRSSNGGIVKEQDRLLPIANVGRIMKQILPQNAKISKEAKETMQECASEFISFVTGEASDKCRKERRKTVNGDDICWALKTLGFDDYAEPLKSYLHRYRELEVDQRANNSNHHHHH 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1233g00010 132 PRINTS CCAAT-binding transcription factor subunit A signature 97 115 - -
Pral1233g00010 132 PRINTS CCAAT-binding transcription factor subunit A signature 59 77 - -
Pral1233g00010 132 PRINTS CCAAT-binding transcription factor subunit A signature 78 96 - -
Pral1233g00010 132 SUPERFAMILY Histone-fold 28 129 IPR009072 GO:0046982
Pral1233g00010 132 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 31 95 IPR003958 -
Pral1233g00010 132 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 18 125 IPR027113 GO:0001228|GO:0006355|GO:0016602
Pral1233g00010 132 FunFam Nuclear transcription factor Y subunit B-3 20 132 - -
Pral1233g00010 132 ProSitePatterns NF-YB/HAP3 subunit signature. 62 78 IPR003956 GO:0005634|GO:0006355|GO:0043565
Pral1233g00010 132 Gene3D Histone, subunit A 22 132 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1233g00010 Pral-Chr1233 51433 52135 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1233g00010 24 129 CCAAT-HAP3 Transcription Factor Family AT2G47810 79.245 1.15e-58 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Pral1233g00010 CBFD_NFYB_HMF 4.9e-27 CL0012