Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1233g00009 ATGTTTAATCCCCAACGCCTCAAACCACTTCTTCTATGCCTGAAGGGTATTATCAGAACGTCACCAACCTCGCGATGCTTTCGTCTCTTACAACACTACCCTTCACTCACATTCTCTCTCAAATACCGCACAAGCGCTTCTCCAGATGAGCGCTTGTTTACTGTATCATACCTCATTAACAGGTTAGGGTTTTCCCAAGAAGCTGCTTTAGATGCTTCCAAGAAAGTTCGATTTGGCACCTCGCGAAAGCCAGATTCAGTTGTCATCTTCTTTGAAAGCCACGGCTTCACTAAGTCAATGATAAAAGATGTCATTAAAAGGGATCCGTGGCTTCTTGTGTGCGATCCCCAAAATAATATTCTGCCGAAGTTTGAATTTTTCCTCTCAAAAGGTGCTACTACCTCCGACCTTAACTCCATGGTGCTAAGGACACCTAGATTCTTGATGAGAAGCTTAGAGAATCACATAATCCCATCATATGAGATGTTAACAGGGTTTCTTCAAAATGATAAAACCACCATTTCATGTATAAAAGGCTATCCAGATGTGCTTTATGACACTCGAGTGAGACAATGTATTAACTTGTTGCTTAATAATGGAGTGTCAAGGACAAACGTTGCTCTCATACTCAGAAGGAAGCCTCGTGTGCTGCACTGCCCTGATCTCCTTACAAAGGCGATAGAGGAAGTTAAATGTTTGGGATTTAATCCTTTGAACATAGCATTTAGTGTTGCATTGGTAGCCAAAATGAGTTTAAGTAGGTCCCGCTGGGAAGCAAAAGTTGATGTCTACAAGAGATGGGGATGGTCAGAAGAAGAATGGTCAGAAGCATTTAGGAAGCAGCCGCATTGTATGTTAGCATCCGAGGATAAAATTGATGCAGTTATGAGTTTTTGGAGTAACCATTTGGGTTGGAATCCTTTGCTTCTTGTCAAAAGACCACATATGTTTGGATATAGCTTGAAGAGAAGGATTATCCCGAGGGCTTCCGTTTTACATTATCTTAAGTCCAAAGGGTTGATAAAAAAGGATGCTAACTTGGTTACGCCATTTACTATATCTGAAGAGCAGTTCTTGGAAAGATTTGTGAAATATTTTGAGGAGCATAATCATCATCTATCGAAGCTATATGGAGAAAATTTGAAGAATGATGGGCTTCATTTTCATGAAATATTGAAATTTTAA 1185 0.4008 MFNPQRLKPLLLCLKGIIRTSPTSRCFRLLQHYPSLTFSLKYRTSASPDERLFTVSYLINRLGFSQEAALDASKKVRFGTSRKPDSVVIFFESHGFTKSMIKDVIKRDPWLLVCDPQNNILPKFEFFLSKGATTSDLNSMVLRTPRFLMRSLENHIIPSYEMLTGFLQNDKTTISCIKGYPDVLYDTRVRQCINLLLNNGVSRTNVALILRRKPRVLHCPDLLTKAIEEVKCLGFNPLNIAFSVALVAKMSLSRSRWEAKVDVYKRWGWSEEEWSEAFRKQPHCMLASEDKIDAVMSFWSNHLGWNPLLLVKRPHMFGYSLKRRIIPRASVLHYLKSKGLIKKDANLVTPFTISEEQFLERFVKYFEEHNHHLSKLYGENLKNDGLHFHEILKF 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1233g00009 394 Gene3D Transcription termination factor 3, mitochondrial 169 375 IPR038538 -
Pral1233g00009 394 SMART mt_12 138 169 IPR003690 GO:0003690|GO:0006355
Pral1233g00009 394 SMART mt_12 307 341 IPR003690 GO:0003690|GO:0006355
Pral1233g00009 394 SMART mt_12 207 236 IPR003690 GO:0003690|GO:0006355
Pral1233g00009 394 SMART mt_12 102 133 IPR003690 GO:0003690|GO:0006355
Pral1233g00009 394 SMART mt_12 275 306 IPR003690 GO:0003690|GO:0006355
Pral1233g00009 394 PANTHER CGI-12 PROTEIN-RELATED 52 364 IPR003690 GO:0003690|GO:0006355
Pral1233g00009 394 FunFam Mitochondrial transcription termination factor-like 152 370 - -
Pral1233g00009 394 Pfam mTERF 90 175 IPR003690 GO:0003690|GO:0006355
Pral1233g00009 394 Pfam mTERF 186 358 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1233g00009 Pral-Chr1233 43162 45609 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pral1233g00009 mTERF 6.2e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1233g00009 K15031 - gmx:102667698 328.946