Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1233g00007 ATGATTCAGGAAAGGTTTCAGCATTCAGGAGAAACTGTCAGTCTGCATTTTCATAAAGTGTTGGCTGCTTGCCTCAATTTATCTCGAGAAAATATCAGGCCAACTGATCCTACATTTTCCTCTTGTCACCCAAAAATAACAAATGATCCACGATACTTCCCATTTTTTAGGGATGCAGTTGGAGCAATTGATGGTACTCACATAAACTGTAGTGCACATGATGCTCGTGTCTTTCATTCTGCTATCTCAACTCCATCCATGAATTTCCTCATCCACTCGAAGAAAATATTATTGGTTGATGCTGGTTATCCATCACAAGTGGGATACCTTGGCCCGTACAGACGTGAGCGCTATCATCTCCCAGACTTTAATCGTCACCCAGGATTTACAAATCAGAATGAGGCCTTCAATTATTATCATTCAAGTTTGAGATCCACTATTGAAAGAACTGTTGGGGTGTGGAAGAATAGGCAAAATTCTCCAACTGATGACCGCTTTATAGAAGCTGAACATGGAAGTGTAATAGACGAAGACAATAATCATGCAGCTGAAATCAGTTGTACCCATCGACAATCGAAACATGGCCATAGACGTCAGCCCGTTCCGCCTTCGTTCCCGATAGCTTACTCTGACCTAGCTCTTGCAAGGATTGCGATAACTTTCAGGCTCTTTAGCAGCTCAAGCTCTTCAAAAATCACGGGTATTCTCAGAAAATCACCATCCCCACAATGCTTTCGTCTTTTGCAACGCTACCCATCACCAGCATTCTCTCTCAAATTCAGCACAGGGTCTTCTCCAGATAATCACTCGTTTACTGTATCATACCTCATTAACAGTTTAGGGTTCTCCCAAGAGGCTGCCTTAAATGCTTCCGAGAGAGTTCGATTCGAGACCTCAGTAAAGCCAGATTCAGTTGTCAGCTTCTTCAGAAGCCACGGCTTCTCTGAATCTCTCATACACGATCTCATTAGAAGGGATTTGTCACTTCTTCTATGCAATCCCTGCAATAAGATTCTTCCCAAGTTTGAATTTCTCCTCTCAAAAGGTGCTTCTACCTCCGACATCGTCCTTATGGTGCATAAGAGTCCGAGATTCCTAAAACGAAGCTTGTCCAATCACATAATCCCGTCATATGAACTACTATTAGGGTTTTTGCATACTGATGAAGCCACCATCGATTGTATAAAATGCTACCCAGATATTCTTTATGGCCCTCGGTTGATACAAAATATCGAGTTGCTGCTTAAGAATGGAGTGTCAAGAACCAACATTACTCTCATACTCAAAAGGAGGCCTCGTTCACTATCCCGCACAGATGATCTTGCAAAGATGGTGGAGGAAATTGAGTGTTTGGGGTTTGATCCTTCGAATTCAACATTTTATGTTGCGTTGTTAGCCAAAATATCTTTGGGCAAGTCCCACTGGGAAGCCAAAGTCGGCGTCTTCAAGAGATGGGGATGGTCAGAAGAAGCATGGTCAGAATCATTTCGGAGGCAACCGCACATTATGTTAACCTCCAAGGATAAAATTGATGCAATTTTGAGTTTTTTGAGTAACCATTTGGGTTGGGATCCTTTGATCCTTGCCAAAAAACCAAATTTATTGATATATAGCTTGAAGAGAAGGATCATCCCAAGGGCTGCAGTTTTAGATTATCTTCAGTCAGAAGGGTTGATAGAAAATAAAGCTGGCTTAACTGTGCCGTTTGAGATCCCTGAAAAGCAGTTCCTGGAAAGATTTGTGAAACGCTATGAGGAGCATAATTATCATCTGTTGAAGCTTTATGAAGAAAAAAAGGAATTATGA 1806 0.4169 MIQERFQHSGETVSLHFHKVLAACLNLSRENIRPTDPTFSSCHPKITNDPRYFPFFRDAVGAIDGTHINCSAHDARVFHSAISTPSMNFLIHSKKILLVDAGYPSQVGYLGPYRRERYHLPDFNRHPGFTNQNEAFNYYHSSLRSTIERTVGVWKNRQNSPTDDRFIEAEHGSVIDEDNNHAAEISCTHRQSKHGHRRQPVPPSFPIAYSDLALARIAITFRLFSSSSSSKITGILRKSPSPQCFRLLQRYPSPAFSLKFSTGSSPDNHSFTVSYLINSLGFSQEAALNASERVRFETSVKPDSVVSFFRSHGFSESLIHDLIRRDLSLLLCNPCNKILPKFEFLLSKGASTSDIVLMVHKSPRFLKRSLSNHIIPSYELLLGFLHTDEATIDCIKCYPDILYGPRLIQNIELLLKNGVSRTNITLILKRRPRSLSRTDDLAKMVEEIECLGFDPSNSTFYVALLAKISLGKSHWEAKVGVFKRWGWSEEAWSESFRRQPHIMLTSKDKIDAILSFLSNHLGWDPLILAKKPNLLIYSLKRRIIPRAAVLDYLQSEGLIENKAGLTVPFEIPEKQFLERFVKRYEEHNYHLLKLYEEKKEL 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1233g00007 601 PANTHER CGI-12 PROTEIN-RELATED 268 584 IPR003690 GO:0003690|GO:0006355
Pral1233g00007 601 Pfam mTERF 306 401 IPR003690 GO:0003690|GO:0006355
Pral1233g00007 601 Pfam mTERF 407 563 IPR003690 GO:0003690|GO:0006355
Pral1233g00007 601 Gene3D Transcription termination factor 3, mitochondrial 268 404 IPR038538 -
Pral1233g00007 601 Gene3D Transcription termination factor 3, mitochondrial 405 593 IPR038538 -
Pral1233g00007 601 SMART mt_12 525 559 IPR003690 GO:0003690|GO:0006355
Pral1233g00007 601 SMART mt_12 320 351 IPR003690 GO:0003690|GO:0006355
Pral1233g00007 601 SMART mt_12 425 454 IPR003690 GO:0003690|GO:0006355
Pral1233g00007 601 SMART mt_12 493 524 IPR003690 GO:0003690|GO:0006355
Pral1233g00007 601 SMART mt_12 392 420 IPR003690 GO:0003690|GO:0006355
Pral1233g00007 601 SMART mt_12 356 387 IPR003690 GO:0003690|GO:0006355
Pral1233g00007 601 FunFam Mitochondrial transcription termination factor-like 370 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1233g00007 Pral-Chr1233 30668 35152 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pral1233g00007 mTERF 1.7e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1233g00007 K15031 - gmx:102663414 314.694