Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1231g00057 ATGGACTGTGGAAAACCACTAGAAGAAGCAGCGTGGGACATTGATGATGTTGCTGGTTGCTTTGAGTACTATGCTGATCTTGCTGAAGGTTTGGATGCAAAGCAAAAGGCTCCTGTATCTCTTCCCATGGACACCTTCAAGTCTTATGTTCTTCATGAGCCCGTTGGGGTTGTAGGATTAATTACTCCCTGGAATTATCCCATGTTAATGGCTACATGGAAAGTTGCTCCAGCTCTGGCTGCTGGCTGTGCTGCAATATTAAAGCCTTCTGAACTGGCATCTGTAACCTGCTTGGAGCTCGCTGATATCTGTATGGAAGTGGGCCTTCCTCCAGGTGTCTTAAATATTCTCACTGGATTAGGCCCTGAAGCTGGTGCTCCTCTGGCATCCCATCCTCATGTAGACAAGATTGCCTTTACTGGAAGCTCTGCAACCGGGAGCAAGATTATGACAGCTGCAGCTCAGCTGCTGAAGCCTGTTTCTTTAGAGCTTGGCGGAAAAAGCCCAATAATTGTTTTTGAGGATGTCGACCTAGATAAAGCTGCTGAATGGACCATCTTTGGCTGCTTCTGGACAAATGGTCAAATATGCAGTGCAACATCCCGTCTTATTGTACATGAAAGCATAGCGGCAGAATTTCTGAATAGAATTGTGAAGTGGATCGAAAATATTAAAATTTCAGATCCCTTGGAAGAAGGTTGCAGGCTAGGCCCTGTTGTCAGTCGGGGACAGTATGAAAAGATATTGAAATTCATTGAAACTGCTAAAAGAGAGGGCGCAACAATTTTGACTGGGGGATCCCGCCCCGAGCATTTAAAGAAGGGATTTTTCGTTCAACCAACTGTTATAACTGATGTGACTACCTCCATGCAAATTTGGAGAGAGGAGGTTTTTGGACCCGTTCTTGCAGTAAAAACGTTTAGTAATGAGGAAGAAGCCATTGAGTTAGCAAATGACACCCATTATGGATTGGGTGCAGCTGTAATATCTAATGATCTAGGAAGATGTGAGCGTGTAACCAAGGCTTTCCAGGCTGGGATCGTTTGGATCAATTGTTCGCAGCCATGCTTCACTCAGGCCCCATGGGGAGGCAAAAAACGTAGTGGCTTTGGTCGTGAATTAGGAGAATGGGGACTCAATAACTACTTGAACGTGAAGCAAGTCACACAGTACATCTCTGATGAACCCTGGGGCTGGTACCGGAAACCTTCGAAGCTGTGA 1221 0.4562 MDCGKPLEEAAWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMDTFKSYVLHEPVGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELASVTCLELADICMEVGLPPGVLNILTGLGPEAGAPLASHPHVDKIAFTGSSATGSKIMTAAAQLLKPVSLELGGKSPIIVFEDVDLDKAAEWTIFGCFWTNGQICSATSRLIVHESIAAEFLNRIVKWIENIKISDPLEEGCRLGPVVSRGQYEKILKFIETAKREGATILTGGSRPEHLKKGFFVQPTVITDVTTSMQIWREEVFGPVLAVKTFSNEEEAIELANDTHYGLGAAVISNDLGRCERVTKAFQAGIVWINCSQPCFTQAPWGGKKRSGFGRELGEWGLNNYLNVKQVTQYISDEPWGWYRKPSKL 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1231g00057 406 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 162 169 IPR029510 GO:0016491
Pral1231g00057 406 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 170 361 IPR016163 GO:0016620
Pral1231g00057 406 FunFam NAD/NADP-dependent betaine aldehyde dehydrogenase 1 180 - -
Pral1231g00057 406 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 2 386 IPR016162 GO:0016491
Pral1231g00057 406 PANTHER ALDEHYDE DEHYDROGENASE 2 405 - -
Pral1231g00057 406 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 190 201 IPR016160 GO:0016491
Pral1231g00057 406 CDD ALDH_F10_BADH 1 390 - -
Pral1231g00057 406 FunFam Betaine aldehyde dehydrogenase 166 357 - -
Pral1231g00057 406 SUPERFAMILY ALDH-like 2 393 IPR016161 GO:0016491
Pral1231g00057 406 Pfam Aldehyde dehydrogenase family 2 388 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1231g00057 Pral-Chr1231 287491 296989 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1231g00057 1 404 Aldehyde Dehydrogenase Gene Family AT1G74920 83.663 0.0 729
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1231g00057 K00130 - mnt:21388241 763.837