Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1231g00052 ATGGGTAGTGATGCTCTCCGGTTACAGGACCCGCCTTGCAGTTCCGGAGAGCTGCATGTTCTTGCCGTCGATGACAGTTATGTTGATCGTAAGGTCATTGAGCGCTTGCTGAAAATATCTTCTTTTAAAGTGACGGTTGTAGAGAGTGGAACTAGAGCTCTTGAATATTTGGGATTGGATGGACAGAAGAGCTCCATTGGATTTGAGAGCGTTAAAGTTAATCTGATAATGACGGACTATTCAATGCCGGGGATGACAGGATATGAGCTGCTCAAGAAGATCAAGGAATCATCTATTTTTAGAGAGATTCCAGTAGTGGTCATGTCGTCTGAGAATATCTTGACTCGAATCGATAGATGCTTGGAGGAAGGAGCAGAGGAGTTTCTGTTGAAGCCAGTGAAGTTGGCAGATGTGAAACGATTGAAAGAATTCATAATGAAGGGTGAAGGGAAGGAAAGTGCAGAGAGGGAATCTCACAAAAGAAAGCGATCAGATGATTGCAGTGCACTTCCACCAACTCCATTCTCATCCGTGTCTTGTCCCATTGATACATCATTCTCTTCACCATCTGCATTGTCCTCAAAGAAGTCTAGATTACGAGCAGATGTTGAGCAAGAACTGCACTTGAAAATGTGA 636 0.4371 MGSDALRLQDPPCSSGELHVLAVDDSYVDRKVIERLLKISSFKVTVVESGTRALEYLGLDGQKSSIGFESVKVNLIMTDYSMPGMTGYELLKKIKESSIFREIPVVVMSSENILTRIDRCLEEGAEEFLLKPVKLADVKRLKEFIMKGEGKESAERESHKRKRSDDCSALPPTPFSSVSCPIDTSFSSPSALSSKKSRLRADVEQELHLKM 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1231g00052 211 ProSiteProfiles Response regulatory domain profile. 19 146 IPR001789 GO:0000160
Pral1231g00052 211 MobiDBLite consensus disorder prediction 170 195 - -
Pral1231g00052 211 Gene3D - 18 207 - -
Pral1231g00052 211 SMART REC_2 18 142 IPR001789 GO:0000160
Pral1231g00052 211 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 204 IPR045279 GO:0009736
Pral1231g00052 211 MobiDBLite consensus disorder prediction 149 167 - -
Pral1231g00052 211 CDD REC_typeA_ARR 20 141 - -
Pral1231g00052 211 MobiDBLite consensus disorder prediction 149 200 - -
Pral1231g00052 211 Pfam Response regulator receiver domain 20 138 IPR001789 GO:0000160
Pral1231g00052 211 SUPERFAMILY CheY-like 17 143 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1231g00052 Pral-Chr1231 270947 273081 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1231g00052 18 162 Response Regulator Gene Family AT3G48100 76.712 1.05e-74 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pral1231g00052 Response_reg 5.8e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1231g00052 K14492 - qsa:O6P43_030919 269.24