Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1231g00051 ATGCAGAGCAGCAAAGAGGTAACCCCAGACAAGAGTTCAAGAGAGAAAGATGGTGGCACCAAAAGGCTGAAGCCTCTTCACTGGGATAAGGTTACAGCCAATGTTGATCATTCAACAGTGTGGGATCAGATCAATGATGGCTCTTTCTTGTTTGATAATCAACTCATCGAAAAACTATTTGGATATTCAAGCACCAACAACAAAACCCAAGAACGATACAAGAGTCATTCAACCAATTCCAACTCCATTTCACCACCTCAAATATTCATTCTGGAGCCTCGAAAATCCCAGAACATTGCGATTGTGCTGAAGTCTTTAGCAATTTCTCGTGATGAAATCCTAGAAGCACTCCTTGGTGGCCAAGGACTCAGTGCTGACACACTTGAAAGACTCATCAGATTAGCTCCAACTCAAGAAGAAGCAGCCAAAATCATCGATTTCAATGGCGACCCAGATAACCTAGCAGATGCGGAGTCTTTCCTTTACAACATCCTCAAAGCACTACCAACGGCATTCACTGGTCTAAAAGCAATGCTTTTCAGATCAAGCTATGATTCTGAAGCACTTCAGCTTAAAGAAAACCTGGGAACCCTTGAAATGGCATGTAAGGAGCTGAGGACTAGTGGTCTCTTCAGAAAACTCCTAGAGGCCATTCTCAAAGCTGGGAACCGAATGAACGCTGGAACTTCAAGAGGCAATGCACAGGGCTTCAACCTAAACTCTCTAAGCAAGCTTTCTGAGGTGAAAAGTACAGATGGTAAGACCAGTTTGCTTCGCTTCATTGTGGAACAAGTGGTTCAGTCAGAAGGAAGAAGGGAAGCTACATATCAGAAGCAGAACCCGACCCCAGGAGATATAGACAGAGAATATCTGACGCTTGGTCTACCAGTACTAGGGGAGCTAGGTGATGAGTTATCTGAAGTAAGAAAAGCAGCCAACATAGAGCATCACAGTTTCATCAGTGTGTGTTCAACTCTGCATGCTCATGTCACTGAAATTCGCCAGATTATGACGTGTTGTAATAATGGTGAGAGAGGTGGGTTTATTAAGGAAATGAAAGGGTTCCTAGAGGACTGTGAAGAAGAGCTGAAAGTGGTGAAAGAAGAACAGGAACGGATCATGGAGCTTGTGAAGAAGACGAACGAGTATTATCTAGCAGGCGGGGCCAAAGACAGCATGTCAAACCCCTTTCAGCTGTTCGTTATAGTAAAAGATTTTGTTAGCATGGTAGATCAGGCTTGCTTACAACTCAAGAAGAAGCTAGAAAAGAAGAACGTAGGAGTAGAAACTCTATTATCAACATCTCCATCAAAGAATATGCGACTCAGATTTCCAAACTTTGATTTCCACTTTGTGTCAAATATGTCAGAAGCAACATCTTCAAGCCAATCAGAGGATGATTTTTGA 1407 0.4286 MQSSKEVTPDKSSREKDGGTKRLKPLHWDKVTANVDHSTVWDQINDGSFLFDNQLIEKLFGYSSTNNKTQERYKSHSTNSNSISPPQIFILEPRKSQNIAIVLKSLAISRDEILEALLGGQGLSADTLERLIRLAPTQEEAAKIIDFNGDPDNLADAESFLYNILKALPTAFTGLKAMLFRSSYDSEALQLKENLGTLEMACKELRTSGLFRKLLEAILKAGNRMNAGTSRGNAQGFNLNSLSKLSEVKSTDGKTSLLRFIVEQVVQSEGRREATYQKQNPTPGDIDREYLTLGLPVLGELGDELSEVRKAANIEHHSFISVCSTLHAHVTEIRQIMTCCNNGERGGFIKEMKGFLEDCEEELKVVKEEQERIMELVKKTNEYYLAGGAKDSMSNPFQLFVIVKDFVSMVDQACLQLKKKLEKKNVGVETLLSTSPSKNMRLRFPNFDFHFVSNMSEATSSSQSEDDF 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1231g00051 468 MobiDBLite consensus disorder prediction 8 25 - -
Pral1231g00051 468 Coils Coil 349 379 - -
Pral1231g00051 468 PANTHER FORMIN-RELATED 8 451 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Pral1231g00051 468 SMART it6_source 13 425 IPR015425 -
Pral1231g00051 468 Pfam Formin Homology 2 Domain 16 411 IPR015425 -
Pral1231g00051 468 ProSiteProfiles Formin homology-2 (FH2) domain profile. 13 436 IPR015425 -
Pral1231g00051 468 SUPERFAMILY Formin homology 2 domain (FH2 domain) 25 424 - -
Pral1231g00051 468 MobiDBLite consensus disorder prediction 1 25 - -
Pral1231g00051 468 FunFam Formin-like protein 20 422 - -
Pral1231g00051 468 Gene3D Formin, FH2 domain 34 430 IPR042201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1231g00051 Pral-Chr1231 267317 268812 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1231g00051 1 466 FH2 protein (formin) Gene Family AT1G70140 46.421 5.55e-146 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1231g00051 - - gmx:100819989 637.876